Colwellia psychrerythraea: CPS_1040
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Entry
CPS_1040 CDS
T00258
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_1040 (dinB)
Enzymes [BR:
cps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPS_1040 (dinB)
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
CPS_1040 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
HHH_5
DNA_pol_lambd_f
HHH_3
HHH
Cdd1
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AAZ27501
UniProt:
Q487H6
LinkDB
All DBs
Position
1067233..1068291
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AA seq
352 aa
AA seq
DB search
MGNQKKIIHIDMDCFYAAIEMRDFPEYQNIPLAVGGDGPRSVLCTSNYQARQFGVRSAMP
AIKAKQLCPHLKIVHGRMDVYKETSKNIREIFSRYTDLIEPLSLDEAYLDVTDATMCQGS
ATLIAERIRADIFNELNLTASAGIAPNKFLAKIASDENKPNGQCVITPDKVANFVEQLSL
KKIPGIGPKTFEKLNRHGYVTCADVRQSNIRALQNIVGKFANSLYLKSHGVDNRDLEVSR
QRKSLAIETTLAHDISTQDECKLVIDSLYQKLLTRLAPHSNREIIRQGVKLKFTDFNQTT
VETQSNECQQALFISLLSKAYSRSNKRGVRLVGLTLGFADSPGESQQLSLSL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatcagaaaaaaataattcacattgatatggactgcttttatgctgctattgaa
atgcgagattttcctgaatatcaaaatatcccattggccgttggtggtgatggcccgcgt
agtgtcttatgtactagtaattatcaagctcgtcagtttggtgtccgttcagccatgccg
gcgattaaagccaaacagctttgtccacaccttaaaattgttcatggccgcatggatgtt
tataaagaaacctccaaaaatattagagaaatattttctcgttataccgatctcattgaa
cctttatctttagatgaggcctatctggatgttactgatgcaacaatgtgtcagggtagt
gcaacgcttattgctgagagaattagagctgatatctttaatgaattaaatttaacggca
tcagcaggcattgcaccgaataagtttttagcaaaaattgccagtgatgaaaataaacct
aatggtcaatgcgttattaccccagataaagtcgctaactttgttgaacaactttcatta
aagaaaatacccggtattggtccaaaaacgtttgaaaaattaaataggcatggttatgta
acttgtgctgatgtacgtcaaagtaatattcgagcgctacaaaatattgtcggtaagttt
gctaatagcttgtacttaaaatcacatggtgtcgataatcgagatttagaagtcagccgg
caacgcaaatctctcgccatcgaaacaacattggcgcacgatatatctactcaagatgag
tgtaagcttgttattgattccttataccaaaaattactcactagactcgctccccacagt
aatagggaaatcattaggcaaggtgtgaagcttaagtttactgattttaatcaaacaacc
gtagaaacacaaagcaacgagtgtcagcaagccctttttatcagtttattatcaaaggca
tatagccgctcaaataaacgcggtgtacggcttgttggtctaacactaggatttgctgat
agtccaggcgaaagtcagcagttgtctctttcgctatag
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