Colwellia psychrerythraea: CPS_1105
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Entry
CPS_1105 CDS
T00258
Name
(GenBank) putative DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_1105
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPS_1105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DnaB_C
Lon_C
AAA_22
SLFN-g3_helicase
AAA_18
RecA
nSTAND3
AAA_16
Rad51
AAA
NPHP3_N
GvpD_P-loop
AAA_14
AAA_19
MMR_HSR1
ABC_tran
cobW
DUF7125
AAA_17
ATPase_2
AAA_30
NTPase_1
AAA_11
NACHT
AAA_24
CobU
Zeta_toxin
Zn_ribbon_FGT1_1
TsaE
AAA_5
KTI12
AAA_28
CBP_BcsE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AAZ27598
UniProt:
Q487B6
LinkDB
All DBs
Position
complement(1126450..1127838)
Genome browser
AA seq
462 aa
AA seq
DB search
MVKAAKIEFVCTDCGMNHTRWQGQCRCGAWNTLVEMKIPKAASKNAATRTTSTGGYAGLT
GGGSKKINEIESIDAEKRSTGIGELDRVLCGGVTTGSVNIISGDPGAGKTTLLSDLVARM
SKTHASLYCTAEESLSQFKNRVHRLKLDYDEDNLYLLAETSVEAIIDELDKNKIKFAVID
SIQAVVTENANGSPGSPSQVKSSAQSLTQYCKQNNVTMFIIAHVNKNNEIAGPQTLVHIV
DALLHIDTNDGQIRTLRANKNRFGDIDTVGIFKMCERGMLSVDNPSEIFLSGSSTESPGS
TITCIRKGNRNLLLEIQCLTTETEAEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTF
FNIVGGLKIDESETCIDLALVTALLSSLNDFVIPRNTCIMGELSLNGDVRPIDSGVPRVK
EAAQHGFTEIFIPYRNYHKSMEGLGANIKAVKTIHELIELIK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagcagcaaaaatcgaatttgtatgcaccgattgcggtatgaatcatacccgt
tggcaaggacagtgccgttgcggagcatggaataccctggtagaaatgaaaataccaaaa
gcagcaagtaaaaatgcagctactcgtacaacaagtaccggtggttatgcaggtttaacg
ggtggcggctctaaaaagattaacgaaatagaatccattgatgcagaaaaaagatcaaca
ggtatcggcgagcttgatcgtgttttatgcggaggagtgacaacaggatcggtaaatatt
atttctggcgatccgggcgcaggtaaaacgaccctactctccgatcttgtcgctcgtatg
tcaaaaactcacgcctcactttattgtaccgctgaagaatccctttctcagttcaaaaac
cgtgtgcaccgattaaagttggattatgacgaagataacctttacctattagctgaaacc
agtgttgaagccatcattgatgaattagataaaaacaaaattaagtttgcggtaattgac
tctatccaagcggtagtcactgaaaatgcaaatggcagtcctggctctccttcacaagta
aaaagcagtgcgcaatcactgacccagtactgcaagcaaaataatgtcactatgtttatt
attgcccatgtaaataaaaacaacgaaattgccggcccgcaaacactagtacacatagta
gatgccctgttgcatattgatactaatgacggtcaaattcgtacgcttagagcgaacaaa
aaccgttttggtgatatcgacaccgtcggtattttcaagatgtgtgaacgcggtatgctc
agtgttgataatccgagcgaaatatttttatcgggttctagtaccgaatctcctggttca
acaatcacctgtattcgtaaaggcaatcgcaatctgctgttagaaattcaatgtttgacc
actgaaaccgaggcagagtttccacaacgtgtttgtgttggtttgaacatgaacagaatt
aaaatgttaaccgggatattgcgtaaacataccaaaacgaagatatttcacgataccttt
tttaatattgtcggcggcttaaaaattgatgagtctgaaacctgtatcgatttagccttg
gtcacagcactattaagcagcctgaatgactttgttatacctcgtaatacctgcatcatg
ggtgaattgagcttaaatggcgacgttagacctatagacagcggcgtacctcgtgttaaa
gaagcagcacagcatggcttcaccgaaatatttattccttaccgtaattatcataaatca
atggaagggcttggcgctaacatcaaagcagtaaaaaccattcatgagctcattgagttg
ataaaataa
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