Colwellia psychrerythraea: CPS_1189
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Entry
CPS_1189 CDS
T00258
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00061
Fatty acid biosynthesis
cps00071
Fatty acid degradation
cps01100
Metabolic pathways
cps01212
Fatty acid metabolism
cps02024
Quorum sensing
cps04146
Peroxisome
Module
cps_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CPS_1189 (fadD1)
00071 Fatty acid degradation
CPS_1189 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CPS_1189 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPS_1189 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cps01004
]
CPS_1189 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cps04147
]
CPS_1189 (fadD1)
Enzymes [BR:
cps01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CPS_1189 (fadD1)
Lipid biosynthesis proteins [BR:
cps01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CPS_1189 (fadD1)
Exosome [BR:
cps04147
]
Exosomal proteins
Exosomal proteins of breast milk
CPS_1189 (fadD1)
Exosomal proteins of breast cancer cells
CPS_1189 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF1576
Motif
Other DBs
NCBI-ProteinID:
AAZ23995
UniProt:
Q486T3
LinkDB
All DBs
Position
1215202..1216857
Genome browser
AA seq
551 aa
AA seq
DB search
MEKIWLEKSYPSDVPFEIDADKYPSIVAMFTKYSTQFSDKTAFINMGASISYAELSVQAT
AFAAYLQQDLGLERGDKFAIMVPNCLQYPIALFGALLAGLTVVNVNPLYTARELEHQLKD
SDAKAMLIIENFAQTLEKVVDKTAVKHVIMTSLGDRLGLVKGTVVNCMVKYVKKMVPAFK
LPHAVRFNTVLSRGLALKLSPVELCGDDLAFLQYTGGTTGLSKGAMLTHRNMVANLQQAK
AAIFPLLEEGNELVVTALPLYHIFALTANCLTFFTMGGTNLLITNPRDMPNFVKELSKYP
FTAITGVNTLFNGLLNTPGFSELNFSTLKMSLGGGMAVQRPVAERWQQITGTRLLEGYGL
TECAPLVTISPYNLAAYDGSIGLPAASTDVKIMREDGSEADIGESGEMWVKGPQVMLGYY
KCVEATEEVLKDGWFATGDVAMMDDKGFFTIVDRKKDMIIVSGFNVYPNEIEEVLAMHEG
VLESAAIGVPHEVSGEVVKIFVVKKSDDLDEKTLIKHCRENLTNYKVPKLVEFRKELPKT
NVGKILRRELR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagatttggttagaaaaaagttaccctagtgatgtgccgtttgaaatagatgcg
gataaatatccatccattgtggctatgttcacaaaatactctactcagtttagtgacaaa
acagctttcatcaatatgggcgcttctatttcttatgcagaactttcagttcaagcaacc
gcctttgcagcatacttacaacaagatttaggtttagagcgaggtgataaattcgccatc
atggtgcctaattgcttacaatacccaatagcattatttggcgctttattagcagggctt
actgttgtaaacgtaaatcctttatatacagcccgtgaacttgagcaccaattaaaagac
tcagatgctaaagcaatgttgattatagaaaactttgctcaaactcttgagaaggtagtt
gataaaacagcggttaaacatgtcatcatgacatctttaggtgatcgattgggcctagtt
aagggcactgttgtcaattgcatggtcaaatacgttaaaaaaatggtacctgcttttaaa
ctgccacacgcggtacgttttaatactgttttatcgcgaggcttagcacttaaattatcg
ccggtagagttgtgtggagatgatctcgcatttttgcaatataccggtggtacaacaggt
ttatctaaaggcgccatgttaacgcatcgaaacatggtggcaaacttacagcaagctaaa
gctgctattttcccattgttagaagagggcaatgagctagtggtaacagcgttaccgctt
tatcatatctttgctttgacggcgaattgtttaacgttctttaccatggggggcactaat
ttattaattaccaacccaagagatatgcctaattttgtaaaagaattatcaaaataccca
tttacagccattacgggtgtaaataccttatttaacggcttattgaatacgcctggcttt
agtgaactaaacttcagcacgttgaaaatgtcacttggtggtggaatggctgtacaacga
cctgttgcagagcgttggcagcaaataacgggtaccagattgttagaaggttatggttta
actgagtgcgcacctttagtgacgataagcccttataatcttgccgcttatgacggaagt
ataggtcttcctgcggcttcaacggatgttaaaatcatgcgtgaagatggtagtgaagct
gatattggcgaatcaggtgaaatgtgggttaaaggccctcaggtaatgctaggttattac
aagtgtgtagaagcgactgaagaagtattgaaagacggttggtttgctacaggtgatgtt
gccatgatggatgataaaggtttcttcactatcgttgatcgtaaaaaagatatgataatc
gtttctggctttaatgtttatcccaatgaaattgaagaagtgcttgccatgcatgaaggc
gtcttagaatctgcggccattggtgtaccccatgaagtttcaggcgaggttgtcaaaatt
tttgtggtaaaaaaatcagatgatttagatgaaaaaacgcttatcaaacattgtcgcgaa
aacctgactaattacaaagtgccaaaactggttgagtttcgaaaagaattacctaaaacc
aatgtaggtaaaattttaagaagagagttacgctaa
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