Colwellia psychrerythraea: CPS_1380
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Entry
CPS_1380 CDS
T00258
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_1380 (phrB)
Enzymes [BR:
cps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CPS_1380 (phrB)
DNA repair and recombination proteins [BR:
cps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CPS_1380 (phrB)
Prokaryotic type
CPS_1380 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AAZ26268
UniProt:
Q485Z2
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All DBs
Position
1420655..1422067
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AA seq
470 aa
AA seq
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MLLWLRNDLRTHDNPALHYFLSRNALSQHDSAVPAKAIFFICEQQWQQHDWSPIKIDFIK
RHAHALVKELALLNIELELIELDNFTQQKTYLHSYCQLHNITEVVANSEVEFNEQQRDKA
LYLELKASGIPLTLLEADVIVPKGKVLNQSGIMYKVFTPFKRAWLTYIQQGGFEYLGKVS
VKSSAVNKADNQEEDQGSISSTWPLATVFEQQILPKFYQQKISTYKLNRDIPSIKGTSGI
SPYLAAGVISPRFVLRLLLNKHPDLLVASDSEEFSWLNEIIWREFYRHLLFHEQRLCKHQ
CYKENYQEMLWHNDAALFDAWCQGRTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTKHL
LIDWRLGEKYFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIRQSERFDPKGVFI
RKYIPELNNISDKAIHFPHQYIKDNELNIYWPAIVEHKEARLKALAFYKV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
ttgctactttggctccgtaatgaccttcgaacacacgacaatccagcgttacactatttc
ctgagtcgtaacgccttaagtcaacatgattcagcagtaccagcgaaagctatctttttt
atctgtgaacaacaatggcaacaacatgattggtcgccgataaagatagattttattaag
cgtcacgcccatgcccttgttaaagaactcgcgctattaaatatcgaacttgaattgatt
gaactcgataattttacccagcaaaaaacgtatttacacagctattgtcaactgcacaat
attactgaagtggtggctaatagtgaggttgaatttaatgaacagcaacgagataaagcc
ttatatttagaattaaaggctagcggtattccattaaccttacttgaagcagacgtaatc
gtaccaaaaggcaaagtcctgaatcagtcgggtattatgtataaggtttttacaccgttt
aagcgtgcttggttaacctatattcagcaaggcggctttgagtatttaggcaaagtatct
gttaaatcgtcagcggttaacaaggctgataatcaagaagaagatcagggaagtatttct
agtacctggccgctagcaactgtttttgagcagcaaatactaccaaagttttaccaacaa
aaaataagcacttacaaacttaatcgtgatataccatcgattaaaggtacgtcgggtata
tcaccttatttggctgcaggtgttatcagtcctcgttttgtacttcgattattacttaac
aaacatcccgatttgttagtcgcgtcagacagtgaagaattttcatggttgaatgagatt
atttggcgagagttttatcgccacctgctttttcatgaacaacgattatgtaaacaccaa
tgttataaagaaaattatcaagagatgttgtggcataacgatgctgcattatttgatgcg
tggtgccaaggcagaactggctacccacttgttgatgctgcaatgaggcagctcaatcaa
acaggctggatgcataatcgtcttcgtatggtcgtggcgagctttctaaccaaacattta
ctcattgattggcgattaggtgaaaaatattttatgcagcacctgattgacggcgattta
gcttcaaataatggtggctggcaatgggcggctagcactggctgtgatgcacaaccttac
tttaggatttttaatcctattagacaaagcgaacgttttgatccaaagggcgttttcata
cgtaaatatataccagagcttaacaatatttctgataaggcgattcactttcctcatcaa
tatattaaggataatgaactaaatatttattggccagcgattgttgagcacaaagaggct
aggttaaaagcgttagctttttataaggtgtaa
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