Colwellia psychrerythraea: CPS_1720
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Entry
CPS_1720 CDS
T00258
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps03030
DNA replication
cps03430
Mismatch repair
cps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPS_1720 (holA)
03430 Mismatch repair
CPS_1720 (holA)
03440 Homologous recombination
CPS_1720 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cps03032
]
CPS_1720 (holA)
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_1720 (holA)
Enzymes [BR:
cps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPS_1720 (holA)
DNA replication proteins [BR:
cps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPS_1720 (holA)
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPS_1720 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
ERp29_N
Motif
Other DBs
NCBI-ProteinID:
AAZ28173
UniProt:
Q484Q7
LinkDB
All DBs
Position
complement(1766654..1767718)
Genome browser
AA seq
354 aa
AA seq
DB search
MKIYHNQLDNTLRQGFKPVWLVFGDEPWQKDNSLAAIKNNAKSQGFSEIIRFSSDTAFDW
QQLLDEYQSLSLFASQRIIEVELTTVKVGDAGNKALLALAERLTQDINSGHVPQDVIFIF
HGAKLDAASANRKWFKSLTQLGCYLPLYDIELKLMPQWLNNQARQLKLNISPELNALLIE
LFEGNLLALAQELDKLVLLFGSQTISVEQAEQLIIKQAKFNPFQVIEVLLRGDCAKCITM
LDQLQQEGMAPAQLIWVFHKEINQLYAMLNQLAQGESIANIYKQYRIWDKRKPLYQHALT
HIKLDNVKRAMMRIADIDLLSKTSSEFNIFILLADLCITLYHGEKTAAFSLNYG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttaccataaccaactagacaatacgctacgacagggttttaaacctgtgtgg
ttggtttttggtgatgagccatggcaaaaagataacagcttagctgctattaaaaataat
gctaaaagccaaggatttagtgagatcattcgttttagtagtgatactgcttttgattgg
cagcagttgcttgatgaatatcaatcactaagcctttttgccagccaacgtatcattgaa
gtagagttaacaacggtaaaagttggcgatgcaggaaacaaggctttactcgctttggct
gagcgcttaacgcaagacattaatagcggtcatgttccacaggatgttatttttatattc
catggcgcaaaacttgatgcagctagtgcaaatagaaaatggtttaaaagtctaacccaa
ttaggctgttatttacccttgtatgatatcgagctaaagctcatgcctcaatggttgaat
aatcaagccagacagttgaaacttaacatctctcccgaattaaacgcgctacttattgaa
ctgtttgaaggtaatttacttgcccttgcccaagagctagataaactggtgttactcttt
ggttcacaaacaattagtgttgaacaagcagagcagttaatcattaaacaagcgaagttt
aatccttttcaggtcatcgaagttttattgcgtggtgattgtgctaaatgtatcactatg
ctcgatcaactgcagcaagaaggcatggcgcccgcgcaactgatttgggtgttccataaa
gagataaaccagttatacgccatgttaaatcagttagcccaaggtgaaagtattgctaat
atttataaacaataccgtatatgggataaacgtaaacctttgtaccaacatgccttaact
cacatcaaacttgataacgtaaagcgagccatgatgcgtattgctgatatagacttatta
agtaaaaccagcagcgagtttaatatttttattctattagctgatttgtgcatcaccttg
tatcacggtgaaaaaacagcagcctttagtcttaattatggctaa
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