Colwellia psychrerythraea: CPS_1787
Help
Entry
CPS_1787 CDS
T00258
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG, TIGR01125
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cps03009
]
CPS_1787
Enzymes [BR:
cps01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CPS_1787
Ribosome biogenesis [BR:
cps03009
]
Prokaryotic type
ribosomal protein modification factors
CPS_1787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AAZ28467
UniProt:
Q484J7
LinkDB
All DBs
Position
1830310..1831674
Genome browser
AA seq
454 aa
AA seq
DB search
MIAEQHQAVVDSGASKKGAKVGFVSLGCPKNLVDSERILTQLRTEGYDVTNSYDDAELVI
VNTCGFIDSAVQESLDTIGEALAANGKVLVTGCLGVKKDEIIELHPNVLGVTGPHAYDEV
LAQVHEHVAKPEHNPFIDLVPPQGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLDSR
PVGDVLGEAKRLVDSGVKELLVISQDTSAYGVDVKHKTDFWDGMPVKTHMQQLCEELAKQ
GVWIRLHYVYPYPHVDKIIPLMAEGKILPYLDIPFQHANKRILKLMKRPGSSDRVLERIA
KWREICPELVIRSTFIVGFPGETEEEFEELLNFLEEAQLDRVGCFKYSPVEGATANALPD
HVSDEVMEDRLQRFMAVQAKISSDKLQVRIGQEYLILVDEVNGLGIVGRSYMDAPEVDGK
VYLSDDYDAKPGDQIWVQIIHADEHDVWGVRVED
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagagcaacatcaagccgttgttgactcaggcgcatcaaaaaaaggcgctaaa
gttggtttcgtttcacttggctgcccaaaaaacttagttgatagtgagcgtatacttacg
caacttcgtactgaaggttatgacgtaaccaatagctacgatgatgcggaattagtgatt
gtaaatacttgtggttttattgatagcgcagtacaagaatctttagataccatcggcgaa
gcgttagctgcaaatggtaaagtgttggttactggttgtttaggcgttaagaaagatgaa
attattgagttacaccccaatgtattaggtgttacgggtcctcatgcttatgatgaagta
ttggctcaagtacatgaacatgtcgctaaacctgaacataacccatttattgatttagta
ccgccgcaaggggttaagcttacgcctaagcattatgcttatttaaaaatatcagaaggc
tgtaatcaccgctgtacgttctgcattattccatcaatgcgcggcgatttagactctcgt
ccagtgggtgatgtattaggtgaagcaaaacgcttagttgattcgggtgtaaaagagtta
ttagtgatctcacaagatacttctgcttatggcgttgatgttaaacacaaaacagatttc
tgggatggcatgcccgttaaaacacatatgcagcagctatgtgaagaattagcaaagcag
ggcgtttggattcgtcttcattatgtttatccgtatccgcatgttgataaaatcattcca
ttgatggcggaaggtaaaatattaccttatttagatattccttttcagcatgcgaacaaa
cgcattcttaaattaatgaaacgtcctggtagctcagaccgagtattagagcgtattgct
aaatggcgagaaatttgtcctgaattggtgataagatcaacttttattgttggtttcccg
ggtgagacagaagaagaatttgaagagttattaaactttttagaagaagcacaattagac
cgagttggttgttttaaatattcacctgttgaaggtgctaccgctaatgcgttacctgat
catgtttcagatgaagtaatggaagaccgtctgcaacgttttatggcagtgcaagcgaaa
atcagtagcgataaattacaagtacgcattggtcaagaataccttattcttgttgatgaa
gtgaatggtttaggtattgtaggccgttcatatatggatgcaccagaagttgacggtaaa
gtttatttgtcagatgattatgatgccaaaccaggcgaccaaatttgggtacaaatcatt
catgccgatgaacatgatgtttggggcgttcgcgtagaagattaa
DBGET
integrated database retrieval system
