Colwellia psychrerythraea: CPS_1873
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Entry
CPS_1873 CDS
T00258
Symbol
hupB1
Name
(GenBank) DNA-binding protein, HU family
KO
K03530
DNA-binding protein HU-beta
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cps03032
]
CPS_1873 (hupB1)
03036 Chromosome and associated proteins [BR:
cps03036
]
CPS_1873 (hupB1)
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_1873 (hupB1)
DNA replication proteins [BR:
cps03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPS_1873 (hupB1)
Chromosome and associated proteins [BR:
cps03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CPS_1873 (hupB1)
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CPS_1873 (hupB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AAZ28647
UniProt:
Q484B2
LinkDB
All DBs
Position
complement(1926929..1927204)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELVEKIAEGADISKASAGRALDSLIGSVTTELANGGDVALVGFGTYKVNDRAARTG
RNPQTGAEIQISAAKVPAFKAGKALKDAVNV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagtgaattggtagagaaaatcgctgaaggcgcagacatttcaaaagcttca
gctggccgtgctttagatagtttaattggttctgtaacaactgaattagctaatggcggt
gatgtcgcattagtgggttttggtacttacaaagtaaatgaccgtgctgctcgtacaggt
cgcaatcctcaaacaggtgcagagatccaaatttctgcggcgaaagtacctgcttttaaa
gcgggtaaagcattgaaagacgcagtaaacgtttag
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