Colwellia psychrerythraea: CPS_1920
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Entry
CPS_1920 CDS
T00258
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cps03000
]
CPS_1920
Transcription factors [BR:
cps03000
]
Prokaryotic type
Helix-turn-helix
Other families
CPS_1920
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
Mg_chelatase
AAA_5
GAF
HTH_8
AAA_2
AAA
AAA_16
GAF_2
AAA_19
AAA_22
AAA_7
nSTAND3
AAA_3
Beta_elim_lyase
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AAZ27925
UniProt:
Q483W6
LinkDB
All DBs
Position
1977972..1979510
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AA seq
512 aa
AA seq
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MLEKTLLKIALDLSLSLPKKAHYQRLMLAVNEVMPCDAVALLVLQDDYLVPVAVDGLSPE
VLGMRFSPEEHPRLKAILSSRKPIRFDADSSYPDPYDGLLSIDPKRVLDVHDCMGCCLYV
EENLVGVLTLDALQVGAFSNVDDITVATLAALAAATIRNANCIAVLEKRNEKALCLTNEL
VKDAHKAKGDDFVGESPKMLELKNEIKVVANSELSVLITGETGVGKEVVARTVHAQSRRS
EEAIVQINCAALSENIAESELFGHVKGSFTGANKDRMGKFELANHGTLFLDEIGELSLNL
QAKLLRAIQEGEIQRVGADKNFYVDVRIIAATNRDLSKEVAQGRFREDLYHRLSVFPLNV
PSLRERIDDIPQLSGFILNNIKGKIGTNNVRVSKTAMHQLMQYDWPGNVRELQHVLMRAA
LRAAASAEGKVAVIELKHLGSDFVADSAVESGSITPVISTDNKSFNEILSDFQRQLITQA
MEDNDHVWAKAARQLQLDRGNLYRQAKRLGLT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgaaaaaacgttactaaaaattgctttagatctgagtttaagtttacctaaaaaa
gcccattatcagcgtttaatgctggccgttaatgaagtaatgccttgtgatgcagtagcc
ttattggtattacaagatgattatttggttcctgtcgcggttgacggtttgtcacccgaa
gtactgggaatgcgcttttctcctgaagaacacccaagattaaaagctatcttatcttcg
cgtaaacccattcgttttgatgctgactcaagttaccctgacccttatgatggtctgcta
tcgatagaccccaaacgtgtacttgatgtacacgattgtatgggctgctgtttatatgtt
gaggaaaaccttgttggcgtgctcacgctggatgcgttacaagttggtgcctttagtaat
gtcgatgatattaccgttgcgactttagctgcacttgcagcagcaacgatacgtaatgct
aactgtatcgctgtgttagagaaaagaaatgagaaagcattgtgtttaactaatgaattg
gtgaaagacgctcataaagccaaaggtgacgattttgttggtgaaagcccgaagatgttg
gaattaaaaaatgagatcaaggtagtcgccaattcagagctttcggtattaattaccgga
gaaactggcgtgggtaaagaggttgtcgcacgtactgttcatgcgcaatcacgtcgaagt
gaagaagcaatcgtacaaataaattgtgcggctttgtcagaaaatatcgcggaaagtgaa
ttatttggtcatgtgaaaggctcgtttactggcgccaataaagatcgcatgggtaagttt
gagctcgccaatcacggtacattattcttagacgaaataggtgaactgtctttaaatctt
caagcaaaactattaagagctattcaagagggcgagatccagcgggttggagcggataaa
aatttctatgttgatgtgcgaattattgctgccactaatcgagatttatccaaagaagtt
gcccaaggacgattcagagaagatctttatcacaggttaagtgtatttccgcttaatgta
ccgtctttacgtgaacgaattgatgatattccacagttgagtggctttatcttaaataat
attaaaggaaaaattggcaccaacaatgtcagagtgagtaaaacggctatgcaccaactc
atgcaatacgattggccaggcaatgtcagagaactgcaacacgtgcttatgcgtgcagca
ttgagagctgcagccagcgcagaaggaaaagtagcagtgatagaacttaaacatttaggt
tcagattttgttgcggatagcgctgttgaaagtggcagtattactccagtaatttctact
gacaataaatcatttaacgaaatactatcggattttcaacgtcagttgatcacacaagca
atggaagataatgatcatgtgtgggcaaaagctgcacgtcaactgcaacttgatagaggc
aatttatatcgtcaagcgaaacgtctagggttaacctaa
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