Colwellia psychrerythraea: CPS_2331
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Entry
CPS_2331 CDS
T00258
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cps03032
]
CPS_2331 (gyrA)
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_2331 (gyrA)
Enzymes [BR:
cps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CPS_2331 (gyrA)
DNA replication proteins [BR:
cps03032
]
Prokaryotic type
DNA Topoisomerases
CPS_2331 (gyrA)
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPS_2331 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AAZ25958
UniProt:
Q482G7
Structure
PDB
PDBj
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All DBs
Position
2427346..2430072
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AA seq
908 aa
AA seq
DB search
MSDLAKQIVPVNIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMDVLGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHSILADLDKETVDFVPNYDGTEHIPAVMPTRVPNLLVNGTSGIAVGMAT
NIPPHNLTEVINACLALIDNSELTFEEILEHIPGPDFPTAGIISGRAGIEEAYRTGRGKI
KIRARASIDVHETTGKETIIVHELPYQVNKARLIEKMAELVKDKRLEGISALRDESDKDG
MRMVIEIKRGEVGEVVLNNLYKLTQMQVSFGLNMVALTNGQPKIFNIKEMLEAFVLHRRE
VVTRRTIFELRKARDRAHILEGLSIALANIDPIIEMIKNSNNRKESEEKLISQGWELGNV
ANMLSEAGNDAARPEWLEPEYGIRDGLYYLTAEQAKAIVDLQLYKLSGMEHDKILSEYKA
LLDLIAELMHILATPARLMEVICEELVAIRDEFGDERRTEITNASHDLSLEDLITEEDVV
VTLSHEGYVKYQVLSDYEAQRRGGKGKAATKMKEEDFIERLLVANTHDTILCFSDRGKLY
WLKVFQLPLASRTARGRPIVNILPLESDERITAILPVRDYADDKYIVMATASGTVKKTRL
DAYSNQRANGIIALNLRDDDTLIGVDITDGTNDVMLFSDAGKVVRFNEKVRDSETGEIKL
DPETGEQRWALKPIGRTGTGVRGIKLEGEQKVVSLIIPKNDGPILTITENGFGKRTDLAE
YPAKSRATKGVVSIKVSERNGKVVGAVQVEDLDEIMLITDSGTLVRTRVNEVSVIGRNTQ
GVRLIRTADDEHVVALQRIDEIEEPAELEEVAEGDEVIETSVEPSSEDNPEHSAQQDVAD
TSQDDNQE
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctggccaaacaaatagttccagttaatattgaagatgaactaaaaacctcc
tatttagattatgccatgagtgtaatagttgggcgcgcattgcctgacgttcgtgatggc
ttaaaacctgtacatcgtcgggtgttattcgccatggatgtattaggtaatgattggaat
aaagcctataaaaaatcagcccgtgtggttggtgatgtaataggtaagtatcaccctcat
ggtgatactgcagtttacgatacaatagttcgtatggcacagccattctccttacgttac
atgcttgtcgatggacaaggtaacttcggctctgttgatggtgatagcgcagctgcaatg
cgttataccgaaattagaatgtctaaaattgcacattctattctagccgatttagataaa
gaaaccgttgattttgtacctaactatgatggtacagaacatataccagcggttatgcct
acccgtgtacctaacttactcgttaatggtacttcaggtattgctgttggtatggcaacc
aatattcctccgcataatttaactgaagttatcaatgcttgtttagcacttattgataac
agtgaattaacgtttgaagaaattttagaacatatccctggtcctgactttccaacagca
ggtattattagtggtcgtgcaggtatcgaagaagcataccgaaccggtcgcggtaaaata
aaaattcgtgcacgtgcaagtattgatgttcatgaaaccacgggtaaagaaacaataatt
gttcacgaactaccttatcaagtaaacaaagcacgcttaattgaaaaaatggctgagctt
gttaaagataaacgtcttgaaggtatttctgctttacgtgatgagtctgataaagacggc
atgcgtatggttattgaaatcaaacgcggtgaagtaggtgaagttgttttaaataactta
tacaaactgacgcaaatgcaggtttctttcggtttaaatatggtggcattaaccaatggc
caaccgaaaatatttaatatcaaagagatgttagaagcatttgttttgcatcgccgtgaa
gttgttactcgtcgtactattttcgaattaagaaaagcacgtgaccgtgctcatatctta
gaaggtttatccattgcattagcaaatatagaccctatcatcgaaatgattaaaaattcg
aataacagaaaagaatctgaagaaaagcttatttcccaaggttgggaactcggtaatgtt
gctaacatgctcagcgaagcgggtaatgatgcagcacgtcctgagtggttagaacctgaa
tatggtattcgtgatggtttatattacttaaccgccgaacaagcaaaagcaatcgtcgac
ctacagttatataaactatctggcatggaacacgataaaattctaagcgagtacaaagcg
ttattagaccttattgcagaattaatgcatattttggctacacctgctcgtttaatggaa
gtgatttgtgaagaacttgttgctattcgtgatgagtttggtgatgaacgtagaactgaa
attactaacgcttcacatgatttgtctttagaagacttaatcactgaagaagatgttgta
gtgacactttcacatgaaggttatgttaagtatcaagtcttaagtgattacgaagctcag
cgtcgcggtggtaaaggtaaagcagcgactaagatgaaagaagaagacttcatcgaacgt
ttactcgtggctaatacacatgacactattttatgtttctcagaccgtggtaaattatat
tggttgaaagttttccaattaccattagcaagtcgtaccgcaagaggtagacctattgta
aacatcttgccattagaaagtgatgaacgtatcactgctatcttaccagtacgtgattat
gccgatgataaatatatcgttatggcaacagcttctggtacggtgaagaaaacgcgttta
gatgcctactctaatcaacgtgctaacggtattattgccttaaaccttcgtgatgatgat
accttaatcggtgttgatattaccgacggtactaacgatgttatgttgttctcggatgcg
ggtaaagttgtccgctttaacgaaaaagtacgtgatagcgaaacaggtgaaataaaactt
gatccagaaacgggtgaacaacgatgggcgttaaaaccaatcggtcgtaccggtactggt
gtacgtggtatcaagcttgaaggtgagcaaaaagttgtttcgcttattatacctaagaat
gatggtccaatcttaaccattactgaaaatggttttggtaagcgtactgatttagctgaa
tatccagctaagagtagagcaacgaaaggtgttgtttctattaaagttagtgaacgaaat
ggtaaggttgttggtgcagttcaagtagaagatcttgatgagataatgctaattactgac
agtggtactctagttcgtactcgtgtcaatgaagtgagcgttattggtcgtaatactcaa
ggtgtacgtttgatacgtactgctgatgatgaacatgtggtagcactacaacgtattgat
gaaattgaagagccagcagagcttgaagaagttgctgagggtgatgaagtcattgaaaca
agtgtggagcccagctctgaagataatccagagcatagcgctcaacaggatgttgctgat
acctcacaagacgacaatcaagagtaa
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