Colwellia psychrerythraea: CPS_2887
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Entry
CPS_2887 CDS
T00258
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cps
Colwellia psychrerythraea
Pathway
cps03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPS_2887 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_2887 (uvrB)
DNA repair and recombination proteins [BR:
cps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPS_2887 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CPS_2887 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AAZ27453
UniProt:
Q480C7
LinkDB
All DBs
Position
complement(3020946..3022967)
Genome browser
AA seq
673 aa
AA seq
DB search
MKKLTICSEYTPSGDQPTAIKQLLEGIESGLAHQTLLGVTGSGKTYTIANVIEKLNRPTM
MLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNEHIEQ
MRLSATKALLERRDVIIIASVSAIYGLGDPDSYLKMMLHISRGDIINQRDILRRLAELQY
TRNDVAFARATYRVRGDVIDIFPAESDRLALRVELFDEEIERISQFDPLTGQVERTLDRV
TVYPKTHYATPKEKIIAAVDKIKIELKHRSQQLKDNNKLVEEQRLTQRTQFDIEMMTELG
YCSGIENYSRYLSGREEGGAPPTLFDYLPDDGLLIIDESHVTVPQIGAMYKGDRSRKENL
VEYGFRLPSALDNRPMKFEEFEAISPQTIYVSATPSKFELEKCGSDIAEQVVRPTGLLDP
EIEVRPVETQVDDLLSEINKRLPLDERVLATTLTKRMAEDLTDYLYDHGIKARYLHSDVD
TVERVEIIRDFRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGR
AARNLNGRAILYGDRITGSMRRAIDETERRRVKQHQYNLDNNITPQGVVRRITDVMGVGS
YSDAKSLDKVAEANTNYHINQQAEEPLLTTSQIDTKIVELEKLMQGHAQNLEFEQAAAMR
DKIAKLRIQQLST
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaactatttgctctgaatatactcctagtggtgatcaaccaacagcgata
aagcaactgttagaaggtattgagtcgggtttagcccatcaaacgcttttaggtgtaacc
ggctcaggtaaaacttataccattgccaatgtgattgaaaagcttaatcgacctaccatg
atgttagcgcccaacaaaacgttggcggcgcaattgtatggtgaaatgaaggaatttttc
ccagataatgccgttgaatactttgtttcatattatgattattatcagcctgaagcttac
gtgccaacgacagatactttcatagagaaagatgcttcagttaatgaacatatcgagcaa
atgcggctatcggctactaaggcacttttagagcgccgagacgtgattattattgcttct
gtgtcggctatttatggtttaggtgatcctgactcctatttaaaaatgatgttacatatc
agtcgaggtgacattataaatcaacgcgatattttacgtcgtctcgctgaactacaatat
actcgtaatgatgttgcttttgcgcgtgccacttatcgagtgcgcggtgatgttattgat
atttttcctgctgaatctgaccgcctggctttacgtgtagagctatttgatgaagaaata
gagcggataagtcaatttgatccgctaacaggacaagttgaaagaacactggatcgggta
acagtatacccaaagacacactacgctacgcctaaagagaaaatcatagcagcagtagat
aaaattaaaatagagctgaagcataggtcacaacaactcaaagataataataaattagtc
gaggaacagcgccttactcaacgaacccagtttgatattgaaatgatgactgaacttggt
tattgctctggtatcgagaactattctcgctatttatcagggagagaagagggaggagca
ccaccaaccttattcgattatttacctgatgatggtttacttattattgatgaatctcat
gttaccgtgccacaaattggcgctatgtataaaggagatagatcgcgtaaagaaaacttg
gtggaatatggctttagactaccgtccgctttagataataggccaatgaagtttgaagag
tttgaagcgatctctccacaaacaatttatgtctcggccacaccaagcaaatttgaatta
gagaaatgtggtagcgatattgcggaacaagtggttagaccgacaggtttacttgaccca
gaaatcgaagttagaccggttgaaacacaagttgatgatttattatcagagataaataaa
cgactaccgcttgacgaaagggtcttagccacaacattaactaaacgtatggccgaagat
ttaacggattacttgtatgaccatggcattaaagcgcgctatttgcattcagatgttgat
acggttgaacgggtagaaattataagagactttagactaggtaaatttgatgttttagtg
ggtataaatttacttcgtgaaggtttagatatgccagaagtatctttagtggcaatttta
gatgcggataaagagggctttttacgttccgatcgttctttgattcaaacgattggccga
gctgcgcgtaatctcaatggtcgagcaatactgtatggagatagaattacgggctctatg
cgacgtgctattgatgaaacagaacgacgtagagtgaagcaacaccagtacaatttagac
aacaatattaccccccaaggcgttgttagaagaattaccgatgttatgggcgtgggaagt
tatagtgatgctaagtcacttgataaagttgcagaagctaatacaaattatcatattaac
cagcaggcggaagaacctctattaaccacgtcacaaattgacactaaaatagttgagctt
gaaaagctaatgcaggggcatgcgcagaatttagaatttgaacaagctgctgctatgcgc
gataagatagcaaaattacgaatacagcaactatctacttaa
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