Colwellia psychrerythraea: CPS_3416
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Entry
CPS_3416 CDS
T00258
Name
(GenBank) putative branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00061
Fatty acid biosynthesis
cps00071
Fatty acid degradation
cps01100
Metabolic pathways
cps01212
Fatty acid metabolism
cps02024
Quorum sensing
cps04146
Peroxisome
Module
cps_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CPS_3416
00071 Fatty acid degradation
CPS_3416
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CPS_3416
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPS_3416
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cps01004
]
CPS_3416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cps04147
]
CPS_3416
Enzymes [BR:
cps01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CPS_3416
Lipid biosynthesis proteins [BR:
cps01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CPS_3416
Exosome [BR:
cps04147
]
Exosomal proteins
Exosomal proteins of breast milk
CPS_3416
Exosomal proteins of breast cancer cells
CPS_3416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AAZ28522
UniProt:
Q47YM9
LinkDB
All DBs
Position
complement(3546129..3548099)
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AA seq
656 aa
AA seq
DB search
MSNLQAATKDFEMGELDTFPKILRQNAKSWPNDIAMREKEFGIWNEFTWVDYNNRVKWLS
LALIKLGVNPKEAIALLGDNRPEWVWGEVAAHSMGCYSIGIFQDSLHEEVVYLLNKSNAT
VVIAEDEEQCDKLLELGDDIPDVKLIVYCDPRGMRKYDDKRLISIEEIYKQGQAIEKMSP
ELYDTYVDATNADETAIYCTTSGTTSKPKIAFLCGGNFVKHCSSYLRADPRQPGDNYVSV
LPLPWIMEQVYAVGQALIARQIVNFVEGQETLMADLREIGPNFVLLAPRVWEGILADVKA
RMMDSTPLKQKLFDYAFALSEKAQLEGKRSGFADFLLMNALKDRLGFSNLKSAATGGAAM
GPDTFRFFQTIGVPLRQLYGQTELCGAYTVHKENDVDYDSVGVAFDTAEVKVINADKEGV
GEVIARTVGMFTGYLDNQKAYDEDVIDGWMHTGDAGYFKPSGHLVIIDRIKDLAKTSNGI
QYSPQYIENKLKFSSFIGEAVILGKDKPYLSAIICIRFSIVSKWAEQQGLGFTNYTSLSA
LPEVYEKLSEEVEKVNATLPDAQKINKFILLYKELDADDGELTRTRKVRRTVIADKYGDI
IESIYDNKEIVDIDTVITFQDGGSSRIQTTLKVATVIENDGSAVSSTSSQTQRKAS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacttacaagcagcaacaaaagattttgaaatgggggagttagatacttttcca
aaaatactgagacaaaatgctaaaagctggccaaatgatattgccatgcgcgaaaaagag
ttcggtatttggaacgaatttacctgggtagattataacaatcgcgttaagtggttatca
ctagcgttaataaaattaggtgttaacccgaaagaagctatcgctttgttaggtgataac
agaccagagtgggtttggggtgaagtagcagcacattctatgggttgttactctatcggt
attttccaagactccttacatgaagaagtggtttacttacttaataaaagtaacgccact
gtagttatcgcagaagacgaagagcagtgtgataaattgcttgagttaggcgacgacatt
ccagatgtaaaacttattgtttattgcgatccacgtggcatgcgcaaatatgatgataag
cgtttgatcagcattgaagagatatataagcaggggcaagcaatagaaaaaatgtcacct
gagttatacgacacttatgttgatgcgactaatgctgatgaaactgctatttactgtact
acatcaggcacaacctcaaaacctaaaatagcctttttatgtggcggtaattttgttaag
cactgtagttcatatttacgtgctgatcctcgccagcctggcgataactatgtatctgta
ttaccacttccatggatcatggaacaagtctatgccgttggccaagctttaattgctcgt
caaatagtcaattttgttgaaggtcaagaaacactgatggctgatttacgtgaaattgga
ccaaactttgttttacttgcaccacgcgtttgggaaggtattttagccgacgttaaagcc
cgtatgatggattctacgccacttaaacaaaaattatttgattatgcttttgcactctct
gaaaaagcacagttagagggtaaacgttcagggtttgccgattttttattgatgaatgcc
ttaaaagatagattaggtttcagcaatttgaaatcagcggcaactggtggcgctgctatg
ggtcctgatacgttcagattcttccagactatcggtgttccgctacgtcaactttatggt
caaacagagttatgtggtgcttacacagttcacaaagaaaatgacgttgattacgacagt
gttggtgttgcttttgatactgctgaagtcaaagttattaatgctgataaagaaggtgtt
ggtgaggttatcgctagaactgtgggtatgttcaccggttatttagataatcaaaaagcc
tatgacgaagatgttattgatgggtggatgcataccggtgatgctggttacttcaaacct
tcagggcacttggtcattatcgaccgaatcaaagatttagctaaaaccagcaatggtatt
cagtactcaccacaatatattgaaaacaaattgaaattctcatcatttattggtgaagcc
gttattttaggtaaagacaaaccttacttaagcgccattatttgtattcgattctctatt
gtttctaagtgggctgaacaacaaggtttaggttttactaactacaccagtctttctgct
ttacctgaggtttatgaaaagcttagtgaagaagtggaaaaagttaacgcgacattacct
gacgcacaaaaaatcaataagtttattttactttataaagaacttgatgcagatgatggc
gaattaacacgtacacgtaaagtacgacgcactgttattgctgacaaatatggtgacatt
atcgagtctatttacgacaacaaagagatagttgatatcgataccgtgattactttccaa
gatggtggtagctcacgtattcaaacgacacttaaggttgcgacggtaattgaaaatgat
ggtagtgctgtttcatcaacaagtagtcaaactcagaggaaagcatcatga
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