Colwellia psychrerythraea: CPS_3519
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Entry
CPS_3519 CDS
T00258
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cps03009
]
CPS_3519 (rluB)
Enzymes [BR:
cps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CPS_3519 (rluB)
Ribosome biogenesis [BR:
cps03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CPS_3519 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AAZ26231
UniProt:
Q47YC7
LinkDB
All DBs
Position
complement(3657686..3658753)
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AA seq
355 aa
AA seq
DB search
MTVDKKKQARKDEALDKKYGTRGTEKKGTAKKGMTKQDVAKKGAAKKGQHKKEPEKAVKV
EFQKATHSDSEKVQKVLARAGKGSRREMETMISEGRVSIDGKVAFLGDRITGTEQIRLDG
HHVKLTAQDEDICRVLVYNKPEGEMCTRKDPEGRPTVFDRLPPLDAGRWVAVGRLDINTS
GMLLFTTDGELANRLMHPSQKVEREYAVRVFGEINEAMLQTLRAGVKLEDGMARFQKITY
RGGEGRNHWFHVVLSEGRNREVRRLWESQDVQVSRLIRVRYGDMEMQRQLPMGGWRELAL
KEVNYYRQLVNLTPEAESKVKVDEKAMDNAKSRRIRRSVKKHQQRHQQSTRRRHK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgacaagaaaaaacaagcgagaaaagacgaagccttagataaaaaatatggc
acgcgtggtactgagaaaaaaggcactgctaaaaaaggcatgaccaagcaagatgtcgca
aagaagggcgcagctaaaaaaggtcagcataaaaaagagcctgaaaaggcagtgaaggtt
gagtttcaaaaagcaacgcattcagactcagagaaagtacaaaaagtattagctcgtgct
ggtaaaggctctcgccgtgaaatggaaaccatgataagtgaaggtcgtgtcagtattgac
ggtaaagtcgcttttctaggtgatcgaatcacaggtaccgaacaaattcgccttgatgga
catcacgttaaacttactgcccaagatgaagatatctgtcgcgtacttgtgtataacaag
ccagaaggtgaaatgtgtacacgtaaagatcctgaaggaagaccaaccgtttttgatcgt
cttcctcctcttgacgcgggtcgttgggttgctgtcggtcgtttggatattaatacttcc
ggtatgttgttgtttaccactgatggtgaattagctaaccgattaatgcatccgtcacag
aaagtagagcgtgaatatgcagtacgtgtctttggtgaaatcaacgaagctatgttacaa
acgttacgtgcaggtgttaaattagaagatggtatggcacgttttcaaaaaattacttac
cgtggcggagaaggtcgaaaccattggttccatgttgtcttatctgaaggacgtaaccga
gaagttcgtcgtttatgggaaagccaagatgtacaagtaagccgtcttattcgagtgcgt
tacggtgatatggaaatgcagcgacaattacctatgggtggttggcgtgaattggcgtta
aaagaagtgaactattatcgtcaattagttaacttaacacctgaagcagaaagtaaagtt
aaagttgatgagaaggcgatggacaatgctaaaagtcgtcgaattcgtcgttcagttaaa
aagcatcagcaacgtcatcagcaaagtactcgtcgccgccataagtag
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