Colwellia psychrerythraea: CPS_3774
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Entry
CPS_3774 CDS
T00258
Symbol
pspF
Name
(RefSeq) sigma-54 depedent transcriptional activator PspF
KO
K03974
psp operon transcriptional activator
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cps03000
]
CPS_3774 (pspF)
Transcription factors [BR:
cps03000
]
Prokaryotic type
Other transcription factors
Others
CPS_3774 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_2
bpMoxR
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AAZ25917
UniProt:
Q47XM9
LinkDB
All DBs
Position
3937178..3938296
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AA seq
372 aa
AA seq
DB search
MASFNQQDNLLGQSNSFLEVLEQISQVATLSKPVLIIGERGTGKELVAARLHFLSKRWEQ
SYLKLNCAALNENLLETELFGYDSGAFTGASKRHEGRFERADKGTLFLDEIANTSGLIQE
KLLRVVEYGEFERVGGSRTINSDVRLVAATNEDLPTLAASGQFRADLLDRLAFDVITLPP
LRERLDDIIMLAEHFAMNMARELEFELFSGFTEKAKRSLLEYHWPGNIRELKNVVERSVY
RCNNPHLPVHELIIDPFESPFRPNQRIKTHDRVNELNKNNISTSDNVVDDSVTVKPSAVD
TAKVAPKVVTQQFPQSLKTLSQEYEIELIQTALAHCQFNQKKTAEALELTYHQLRGYLKK
YNLLDGSITDEL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttttaaccaacaagataatcttcttggccaatcaaatagctttttagaagta
ctcgagcaaatatcccaagttgcaacgttgagtaaaccagtacttattattggtgaacga
ggtacaggtaaagagcttgttgccgcacgtttacactttctatcgaaacgctgggaacag
agctatttaaagcttaattgtgccgcattaaatgaaaacttactcgaaacagaattgttt
ggttacgatagtggcgcgtttactggtgccagtaaacgtcatgaaggacgatttgaacgt
gcggataaaggcacactctttttagatgaaattgccaatacctcaggccttattcaagaa
aagttactgcgcgtagttgaatacggtgaatttgaacgtgttgggggctcaagaacaatt
aatagcgatgttcgtttggtcgctgcaactaatgaagacttacctacgttagcagcatca
ggccaatttagagcggatttattagaccgcttagcctttgatgttataaccctcccccca
cttagagaacgtttagacgacataataatgctcgcagaacattttgctatgaacatggcc
cgcgaacttgagtttgaattatttagtggctttaccgaaaaagctaaacgtagcctgctt
gaatatcactggccaggtaatattcgtgagttaaagaatgtcgttgagcgaagtgtatat
cgttgtaacaatccacatttacccgtacatgaactaatcattgacccgttcgagtcacct
tttagaccgaaccaacgaattaaaactcatgatagagtcaatgaactcaataaaaataat
atttcaacgagtgataatgtagttgatgatagcgttacagtaaaaccttcagcagtcgac
acagctaaagtagcgccgaaagttgtgactcaacaattccctcagtcattaaaaacacta
tcacaagagtatgaaatagaattaatacaaacagcattagctcattgccaatttaatcaa
aagaaaaccgcagaagcactcgaattaacatatcatcaattaaggggctatctaaaaaaa
tataacttgcttgatggtagtattaccgatgaactttaa
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