Colwellia psychrerythraea: CPS_3778
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Entry
CPS_3778 CDS
T00258
Symbol
sapD
Name
(GenBank) peptide ABC transporter, ATP-binding protein
KO
K19229
cationic peptide transport system ATP-binding protein
Organism
cps
Colwellia psychrerythraea
Pathway
cps01503
Cationic antimicrobial peptide (CAMP) resistance
cps02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPS_3778 (sapD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
CPS_3778 (sapD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cps02000
]
CPS_3778 (sapD)
Transporters [BR:
cps02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
CPS_3778 (sapD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
SMC_N
AAA_16
AAA_29
Mg_chelatase
nSTAND1
CPT
GT-D-like
NACHT
Motif
Other DBs
NCBI-ProteinID:
AAZ26336
UniProt:
Q47XM5
LinkDB
All DBs
Position
3941964..3942977
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AA seq
337 aa
AA seq
DB search
MNLLDIRNLSIELDTPSGRVLAVDRVSLSIKEGEVRGLVGESGSGKSLLAQAIIGVLEDK
WHVHADRFHWRGIDLLRLSIGERRALLCRDIAMIFQEPMSCLDPTTLIGEQLSEAIDTSQ
LSGFFWQRKKQRKEAVIKLLHKVGIKKHVQCINSYPHQLTEAICQRVMIAIALAGRPILL
IADEPTAAMESTTQGQIFRLLANLNQLKNMSILLISHDLENLTHWTNTITVMYSGQFVEA
GSTEQIFNKPMHPYTRALVDSSTKANLQLPTKSRLMTLPGSIPVLQHLPIGCRLGPRCPR
AQKTCVAAPTVSNYHGHKVSCHFPLLRDTGKKIKGSN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaatttactcgacattcgaaatttatccattgagcttgatacacccagcggacgtgta
ttagcagtagatagggtcagtttatcgataaaagaaggtgaagtacgcggattagtcgga
gaatctggctcaggaaagtcactgttagcgcaagctattataggtgttttagaagataag
tggcatgttcatgctgatcgattccattggcgaggaatcgatttattgcgcctatccata
ggtgagcgtagggccttattatgtcgtgatatcgcgatgatcttccaagaaccgatgagc
tgccttgatcccacaacgttgataggtgagcagttaagtgaagccattgatacctcgcaa
ttgtctggcttcttttggcaacgcaagaaacaacgtaaagaagcggtaataaagttactg
cacaaagtaggtattaagaagcatgttcaatgcattaatagctaccctcatcaactgact
gaagcaatttgtcaacgtgttatgatagcaattgcgcttgcgggtagacctattctatta
attgccgatgaacctactgcagcaatggaaagtacaacccaaggacaaatatttaggtta
cttgctaatctaaaccaattaaagaacatgtctatcctattaattagccatgacttagaa
aaccttacccattggaccaacaccattaccgttatgtatagcggtcagtttgtcgaggct
ggtagcactgagcaaatatttaataaacctatgcatccttatactcgcgctttagtcgat
agcagtaccaaggccaatttacagctaccgacaaaatctcgactgatgaccttacctggt
agtattcccgttcttcaacatttacctataggttgtagactcgggcctcgatgccctaga
gcacaaaaaacttgtgtagctgcccctacagtgagtaattaccatggtcataaagtaagt
tgtcatttccctttacttagggatacaggaaaaaaaataaagggttctaattaa
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