Colwellia psychrerythraea: CPS_3803
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Entry
CPS_3803 CDS
T00258
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cps03016
]
CPS_3803 (truA)
Enzymes [BR:
cps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CPS_3803 (truA)
Transfer RNA biogenesis [BR:
cps03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CPS_3803 (truA)
Prokaryotic type
CPS_3803 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
AAZ26378
UniProt:
Q47XK4
LinkDB
All DBs
Position
complement(3965207..3965986)
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AA seq
259 aa
AA seq
DB search
MRYALGIEYDGKNYCGWQRQNNVITVQEKLEKALSKIADEKIEVVCAGRTDTGVNATNQV
IHFDTEKKRKDTAWTLGVNTHLPSDVAVAWVKKVDDDFHARFSATARNYRYIIYNKPLRS
AILSHGISHCHFALDENLMQQGADYLLGKHDFTSFRTVHCQSHSAVRTIKHCRVTRQGDY
LVVDIKANAFLHHMVRNVVGSLMRVGQSQETPHWMKEVLLAKNRCVAGVTAPPEGLYFVD
VDYPENFELPKSRLGPLFL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatgcgttaggcattgagtatgatggtaaaaactattgtggctggcaacgccaa
aataatgttatcactgtacaagaaaagttagaaaaagcattatctaaaattgcggatgaa
aaaattgaagtggtttgtgccgggagaaccgatacaggggttaatgcaaccaatcaagtg
atccactttgacaccgaaaaaaaacgcaaagataccgcttggacgttaggcgtaaacact
cacttaccttctgatgtagctgttgcttgggtaaagaaagttgatgatgactttcatgct
cgctttagtgccacagctagaaattatcgttatattatttacaataaaccccttcgttca
gcaatattgagtcatggtattagtcattgtcatttcgctttagatgaaaatcttatgcaa
caaggcgctgattatcttctcggtaaacatgactttacctcgtttagaacggtgcattgt
caatctcattctgcggttcggactataaaacattgtcgggtgacacgacagggtgattat
cttgtagttgatatcaaagccaatgcttttttacaccatatggtgcgaaacgttgttggt
agcttaatgcgagttggtcaatcacaagaaacaccacactggatgaaagaagttttattg
gctaaaaatcgttgtgttgcaggtgttacggcaccaccagaggggctatattttgtcgat
gtagattaccctgagaactttgagttacctaaaagccgtttagggccattgtttttatag
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