Colwellia psychrerythraea: CPS_3935
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Entry
CPS_3935 CDS
T00258
Name
(GenBank) transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cps03000
]
CPS_3935
Transcription factors [BR:
cps03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CPS_3935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_36
MarR_2
HTH_Crp_2
HTH_11
TrmB
MarR
Motif
Other DBs
NCBI-ProteinID:
AAZ24164
UniProt:
Q47X77
LinkDB
All DBs
Position
complement(4118826..4120337)
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AA seq
503 aa
AA seq
DB search
MKALTLKVFYENSDPNKSSSKQAKYLAIADALRKAIRERQIAPTEALPSARKLAQQLSVN
RHTIMAALAELVAQGWVEVRERSGYRVVENLPIQGSRTINKVAKTPQSFDWKFRVKQTFA
VTPKVKASEYPYNFSGGQPDIRKFPFDEFKSHFSQTCQRPKIDDLSYGDSRGEAELIEEI
ATYLRRVRSITDKELMICNGSQEALYMISQLLLQPGDKVAVEQLGYPPAWAAFERTGATL
IAVKQDERGINPEHLAQVFAKGKVKLLYLTPLHQYPTTVSLDISRRMQIYQLAVQYGVAI
VEDDYDHEFHYDSQPIAPMAADDPAGLVIYISTFSKLMFGGARIGYVVANNALIEQVAAY
KMVMNHKCNVLVQQAVAKWMQQGGFEAHLRRMTRLYQKRRDFMVQQLRSFQDKGLPIHFE
VPAGGMAIWLDTGKSIIGLKEKLLPQQVYLQTEVEFSRFNELPDDLPRTKYRFIRLGFAA
MNEAEVTQGLDIVMNTLYGLVSE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcgttaacgttgaaagtattttatgaaaactcggatcctaataaatcgtcatcg
aagcaagcaaagtatttggcgattgctgatgccttgagaaaggcgattagagaaagacag
attgcgccgacagaagcattaccttctgcacgaaaacttgctcagcagttatcggtaaat
cgtcatactattatggcggccttggctgagttagtagcgcaaggctgggttgaagtaaga
gagcgttcaggttatcgagtagtagaaaacctgccaattcaaggcagtcgtacaataaat
aaagtggcgaaaacaccgcaaagttttgactggaaatttcgagtcaaacaaacctttgct
gttacgccgaaagttaaagcgagcgaatatccttataacttctctggtggccagcctgat
atcaggaaatttccttttgatgagtttaaaagtcatttttcacaaacgtgtcagcgtcct
aaaatagatgatttaagttacggtgatagtcgcggagaagctgagcttattgaggaaata
gccacgtatttacgacgcgttcgctcgattactgataaagagttgatgatttgcaatggc
tcacaagaagccttgtatatgatttcacagttacttctacaacccggtgataaagttgcg
gttgagcagttaggttatccaccagcttgggctgcctttgagcgcacaggtgcgacatta
attgctgttaaacaagatgagcgaggcataaatcctgagcatttagcgcaagtatttgca
aaaggtaaggttaagttgctttatcttacgccattacatcaatacccaacgactgtctct
ttagatatctctaggcgtatgcaaatttatcaattagcggtgcaatacggtgtcgccatt
gtagaagatgattatgatcacgaatttcattatgacagccagccgattgcacctatggct
gctgatgatccagcaggtttggttatctatatatctaccttttcaaaactgatgtttggt
ggcgcacgtattggctatgttgtggcaaataatgccctaattgagcaagtggcggcttat
aaaatggtaatgaaccataagtgtaatgttttagttcaacaagcggtggctaagtggatg
cagcaaggtggctttgaagcacatttacgacgtatgacacgtttatatcaaaagcgtcgt
gattttatggttcaacagctaagatcctttcaagataaaggcttaccaatacatttcgaa
gtacctgctggcggtatggcaatatggcttgataccggtaagtcgattattgggctaaaa
gagaagttacttccacagcaagtgtacttacaaaccgaagtggaatttagtagatttaat
gagttgcctgatgacttacctaggacaaaatatcggtttatccggctgggttttgcggca
atgaatgaagcagaagttacccaaggattggacattgtgatgaatactttatatggcttg
gtcagcgaataa
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