Colwellia psychrerythraea: CPS_4031
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Entry
CPS_4031 CDS
T00258
Symbol
glyA4
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00260
Glycine, serine and threonine metabolism
cps00460
Cyanoamino acid metabolism
cps00630
Glyoxylate and dicarboxylate metabolism
cps00670
One carbon pool by folate
cps00680
Methane metabolism
cps01100
Metabolic pathways
cps01110
Biosynthesis of secondary metabolites
cps01120
Microbial metabolism in diverse environments
cps01200
Carbon metabolism
cps01230
Biosynthesis of amino acids
cps01240
Biosynthesis of cofactors
cps04981
Folate transport and metabolism
Module
cps_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CPS_4031 (glyA4)
09102 Energy metabolism
00680 Methane metabolism
CPS_4031 (glyA4)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CPS_4031 (glyA4)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CPS_4031 (glyA4)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CPS_4031 (glyA4)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CPS_4031 (glyA4)
Enzymes [BR:
cps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CPS_4031 (glyA4)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AAZ24531
UniProt:
Q47WY2
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All DBs
Position
4237657..4238910
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AA seq
417 aa
AA seq
DB search
MFYKNDQIAGFDDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYP
GKRYYGGCEHVDVIEQLAIDRAKELFGADYANVQPHSGSQANAAVFMALLKPGETVLGMS
LAHGGHLTHGSKVSFSGKIYNAVQYGLNEVTGEIDYDEVARLAKEHQPKMIIAGFSAYSR
VVDWQRFRDIADSIGAWLFVDMAHVAGLVAAGLYPNPVPIADVVTTTTHKTLRGPRGGLI
LAKQNDELAKKLNSAVFPAGQGGPLMHVIAAKAICFKEALGEGYVEYQQQVIDNAREMAK
TFQTRGYNVVSGGTDNHLFLLDLIDKGITGKDADAALGRANITVNKNSVPNDPQSPFVTS
GLRIGTPAITSRGFGLEEAAALTGWICDVLDDISNEQVIDDVRSKVLDLCEKNPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttttacaaaaatgatcaaatagccggtttcgatgacagtatttggcaagccatggag
caagaagacaaacgtcaacaagatcacgttgaattaattgcctcagaaaactataccagt
gcgcgcgtgatgcaagcccaaggcagtcaactgactaacaaatacgccgaaggttatcct
ggtaaacgttattacggcggctgtgaacacgttgatgtgattgagcaactggcgattgat
cgtgcaaaagaattgttcggcgctgattacgctaatgtacaacctcattctggctcacaa
gccaatgccgcagtctttatggccttgcttaagcccggtgaaacggtgctgggcatgagc
ttagcgcacggtggtcatttaacccacggctccaaagtgagcttctccggtaaaatttat
aacgcggtgcaatacggcttaaatgaagtaaccggtgaaattgactacgacgaagtagca
cgtcttgcaaaagagcatcaaccgaaaatgattattgccggtttctcagcgtattcacgt
gtagttgattggcagcgttttcgtgacattgccgatagcattggtgcctggttatttgtt
gatatggcccacgttgccggtttagtggccgcaggtctgtatcctaacccagtaccaatt
gccgatgtggtaaccaccactacccataaaaccttacgtggtccacgtggcggcttgatt
ttagcgaaacaaaatgacgaactggctaagaaattaaattcagcggttttcccagcaggt
caaggtggcccattgatgcatgttatcgctgccaaagcgatttgtttcaaagaagcactt
ggtgagggttatgttgagtatcagcaacaggtcatcgataacgcccgtgaaatggcgaaa
acattccaaacccgtggttataacgtagtttctggtggtacggacaatcacctattttta
ttggatttaatcgataaaggtattaccggtaaagacgcggatgctgcgctgggccgcgct
aatatcacggtcaacaaaaactcagtgcctaacgacccgcaatcgccatttgtcaccagt
ggtctgcgtatcggcacaccggccatcaccagtcgtggttttggacttgaagaagcagca
gcattaacgggttggatttgtgatgtgttagatgacattagcaatgagcaagtgattgat
gacgtgcgaagtaaagtgttggacttatgtgaaaaaaatccggtctaccgctag
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