Colwellia psychrerythraea: CPS_4053
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Entry
CPS_4053 CDS
T00258
Name
(GenBank) substrate binding transcriptional regulator, LysR family
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cps03000
]
CPS_4053
Transcription factors [BR:
cps03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CPS_4053
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AAZ27732
UniProt:
Q47WW2
LinkDB
All DBs
Position
complement(4263652..4264587)
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AA seq
311 aa
AA seq
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MKTKSPALSGKLTDTELRTLRIFMAVVHYSGFTPAALELNVSRSAVSIAMADLEKRLSLR
LCERGRAGFSLTTEGREVYRSTRQLFSALDQFRIQINAIHFNLKGELNIGITDNLVTMPQ
MRITSALRELNRLGPDVQINIQMIPPNEIISGVLDGQLHTGVIPVQKHYEGLEYLLLYEE
RSSLYCGQEHELFCRHDSELSPSMLKQYNGVLPAYDQTSEIKALHHELQLSASATDREGV
AFLILTGRYIGYLPDHYAHRWVKEGVMRAILPANMSYLTPFATITKKGAPSNLVLENYLE
QLKLASTTAGG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaatcgccggcattatccggaaaactgactgacactgagctccgtacgttg
cggatatttatggcagtggttcattacagtggctttacgccagcagcattggaactcaat
gtcagccgttcggcagtgagtattgcgatggccgatcttgagaaacgcttatcattgcga
ctgtgtgagcggggtcgtgctggtttttcgctgaccactgagggaagggaagtctatcgt
tcaacccggcaattattttctgcgcttgatcaattccgaattcagatcaatgcgatccat
tttaacctcaagggtgaactcaatatcggcattaccgataaccttgtgacgatgccgcaa
atgcgcatcacctctgcgctcagggaactcaataggctgggacctgatgtgcagatcaat
attcagatgatcccgcccaatgaaataataagtggggtgctcgatggtcagttacatacc
ggagtgatccccgtacagaaacactatgaggggcttgaatatttactcctgtatgaggag
cgctcgtcactatattgcgggcaagaacacgagctgttctgccgacatgatagcgagttg
tctccatcgatgttgaaacaatacaacggtgtgttgcctgcctatgaccaaacatcggag
atcaaggcattgcatcatgaactccagctgtcggcatcagcaacagacagggaaggggta
gcgtttttgattttgactgggcgttatatcggttatttacctgatcattatgcccaccgg
tgggtcaaagaaggagtgatgcgagctatcctgccagcaaatatgagctacctgacgccc
tttgcaacgattaccaaaaaaggcgctcccagtaatctggtgttggaaaattaccttgaa
caattaaaactagccagtacgacagctggaggctag
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