Colwellia psychrerythraea: CPS_4082
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Entry
CPS_4082 CDS
T00258
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CPS_4082 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cps01007
]
CPS_4082 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cps03016
]
CPS_4082 (lysS)
Enzymes [BR:
cps01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CPS_4082 (lysS)
Amino acid related enzymes [BR:
cps01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CPS_4082 (lysS)
Transfer RNA biogenesis [BR:
cps03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CPS_4082 (lysS)
Prokaryotic type
Other AARSs
CPS_4082 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
REF2_M
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
AAZ26689
UniProt:
Q47WT5
LinkDB
All DBs
Position
complement(4295466..4297040)
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AA seq
524 aa
AA seq
DB search
MTDKANNTPVAQDENKLIAERRVKLEKIRSNCSANGFPNDFNREHLAADIQAEHGEKTKE
ELEELQVTYAIAGRVMAKRGPFLVIQDSSGRIQGYAEKTVQKEIRAKWGSLDIGDIVGIK
GILHKSGKGDLYVNMDHYSLLTKSLRPLPEKFHGLSDQETKYRQRYIDLIINEDTRNTFK
MRSKIVAGIRNFLTQRDFMEVETPMLQIIPGGATAKPFMTHHNTFDLDMYLRIAPELNLK
RLVVGGFDRVFEINRSFRNEGISTRHNPEFTMIEFYQAYADYHDLMNTTEEMLRTIAQDV
LGTTTIRNTVKNSEGEVVEEKFYDLGKPFVRLSMVDAILQYGKDHRGAEQLDEAALRDPE
NNFDAIKAMAKAVGVKENSASKVWGPGKYICEIFEEVAEHLLDQPTFITEYPWEVSPLAR
RNDENSFITDRFEFFVGGRELANGFSELNDAEDQAERFQKQVAEKDAGDDEAMHYDADYI
NALEYGLPPTAGEGIGIDRLVMLFTDSPTIKDVILFPHMRPEAE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaagccaataatacacccgtagcacaagatgaaaataaactgattgctgag
cgtcgtgtaaaacttgaaaaaattcgctctaattgttcagctaatggttttcctaacgat
tttaatcgtgaacatttagccgctgatattcaagctgaacatggtgaaaaaaccaaagaa
gaacttgaagagctacaagtaacttatgctattgccggtcgtgttatggcgaagcgtgga
ccatttttagtgatacaagactcgtctggtcgtattcaaggttatgctgaaaaaacagtg
caaaaagagatacgtgctaaatggggttcattagatattggtgatattgttggtattaaa
ggtattttacataaatcaggtaaaggtgatctttacgtgaacatggatcattactcatta
ttaactaagtcacttcgtccattacctgaaaagtttcatggtttatccgatcaagaaact
aagtatcgtcagcgttatattgatttaattattaatgaagatacccgtaatacctttaaa
atgcgttcaaaaattgttgcgggcatacgtaacttcttaacgcagcgtgactttatggaa
gttgaaacgccgatgttgcaaatcataccgggcggcgcaacggctaaaccttttatgacg
catcataatacttttgatcttgatatgtacctacgtatagcaccagagcttaacttaaag
cgtttagtcgttggtggttttgaccgtgtgtttgaaattaaccgtagtttccgtaacgaa
ggtatttcaacgcgtcataatccagaattcaccatgattgaattctatcaagcttacgct
gattaccatgacctgatgaacactacagaagaaatgttacgtactattgcacaagatgta
ttaggtactaccactattcgtaataccgttaaaaattctgaaggtgaagtagtagaagag
aaattctacgacctaggtaagccgtttgtacgcttatctatggttgatgctattttacaa
tacggcaaagatcatcgtggcgctgagcaacttgatgaagcggctttacgtgaccctgaa
aataattttgatgcaatcaaagccatggctaaagctgttggtgttaaagaaaacagtgct
tctaaagtttggggcccaggtaaatacatttgtgaaatatttgaagaagttgcagaacat
ttattagatcaacctacctttatcacggaatacccttgggaagtttcaccactggcgcgt
cgtaacgatgaaaactcattcataaccgatagatttgaattctttgttggtggtcgtgaa
ctagctaatggtttctctgagctgaacgatgcagaagatcaagctgaacgtttccaaaaa
caagtagcagaaaaagatgctggcgatgatgaagctatgcattatgatgccgactatatc
aacgccttagagtatggtttaccaccaacagcaggtgaaggtattggtattgaccgtttg
gtgatgttatttactgattcgccaactatcaaagatgtaattttattcccacatatgcgc
ccagaagcggaataa
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