Colwellia psychrerythraea: CPS_4254
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Entry
CPS_4254 CDS
T00258
Name
(GenBank) lysM domain protein
KO
K02656
type IV pilus assembly protein PilF
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cps02044
]
CPS_4254
02035 Bacterial motility proteins [BR:
cps02035
]
CPS_4254
Secretion system [BR:
cps02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CPS_4254
Bacterial motility proteins [BR:
cps02035
]
Pilus system
Pilus assembly proteins
CPS_4254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_8
TPR_12
TPR_2
TPR_1
LysM
TPR_19
TPR_6
TPR_16
TPR_17
RMD1-3
TPR_9
ARM_TT21_5th
CFAP70_mid_TPR
TPR_10
ANAPC3
RPN7
TPR_11
ARM_TT21_2nd
HAT_PRP39_C
TPR_YpiA_C
CNOT10_TPR
TPR_Sec16
TPR_MalT
Motif
Other DBs
NCBI-ProteinID:
AAZ25201
UniProt:
Q47WB8
LinkDB
All DBs
Position
complement(4482947..4484521)
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AA seq
524 aa
AA seq
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MAKYLISTLLTAISMTLLSGCVTQSFENNEPIVKNQANRDEMAATRISLGLGYLKMGDMS
QAKLNLEKAKKFSPNLVQVHTAFAHYYETVGEGTLAIESFEQALSIKADSADTLNNYGVF
LCRQGNVAAAEVQFLKAIAVPSYLLVSESYENLASCYLQNDNFEKAEMYLNKSIYHSPNR
TSTLFQMVRLQYAMGNYKEAKRYLQKFERSTQRFTANSLSLAYKLYWKLGQRRTARNYAN
MLVKMYPQSWEGKQYLLNELELIDADNLAKKYQLTQKEKNRTLSPSNNKRVVKLSPRKSA
NTPYTSSIKTVTPTMSTANATNNAATTAVKTKAVSTPLITSTTPTAVVSGAALLSTKVAS
TVAVTNKPTSDIAVTDKPASDMAVTKVEDVVPLNEAVDKVIPLATEAVVVNQVVSNSIEP
TSTMPIAATRDVPLPEALPEEVETEVVVAEVIAVAAVSNEFELVDTQEIVHTVVPGENLY
SISVEYNVKLNTLRKWNDISEKNKIRIGDKLYVVDPQTVKNIND
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatatttaatttcaacccttttgacagcaatctctatgacgttgttaagtggt
tgtgttacccaaagctttgaaaataatgagcctatcgtaaaaaaccaagcaaatcgtgat
gaaatggcggcgacgcgtatttccttaggattaggttatttaaaaatgggtgatatgtct
caagcaaaacttaatcttgagaaagcaaaaaaattctcaccgaatttagtccaagtacat
acagcatttgcccattattatgaaacagtaggcgaaggaacgctcgctattgagtcattt
gaacaagccctatccattaaagctgacagtgccgataccttgaataattacggggtattc
ttgtgtcgacaaggtaacgttgctgcagcagaagtacaatttctcaaagcgattgcggta
cctagttatttattagtatcggaaagttatgaaaaccttgcctcttgttatttacaaaat
gacaattttgaaaaagcagaaatgtacttaaataagtctatttaccatagtccaaacaga
acaagtacgttatttcaaatggtacgtctgcaatatgccatgggcaattacaaagaagct
aagcgttacttacaaaaatttgagcgaagtacacaacgttttactgccaattcattatca
cttgcgtataaattgtattggaaactaggccaacgcagaactgcaagaaattacgcgaat
atgttagtgaaaatgtatccacaatcatgggagggtaaacaatacctacttaatgagttg
gagctgatcgacgctgataatttggcaaagaagtaccaactaacgcaaaaagaaaagaat
cgcacattatcaccctctaataataagcgtgtggtaaaactttcgccgagaaaatcagcg
aacacaccttataccagtagtattaaaacagttaccccgacaatgagtactgctaatgcg
acaaataatgcggcaactactgcggttaaaacgaaagcagtgtctacgccattgataaca
agtaccacgccaaccgccgttgtttcaggggctgctttactttcaactaaagtagcaagt
acagttgcagtgacaaataagccaacaagtgacatcgcagtaacagataagccagcaagt
gatatggcagtaacaaaagtagaagacgtggtgccgcttaatgaagcagtagataaagta
attcctttggcaacagaagctgttgtagttaatcaagtggtttcaaattcgattgaaccg
acttcaactatgcctatagctgcgacacgtgatgtacctttaccagaagccttacctgaa
gaagtagaaactgaagtcgtggtagctgaagtcatagcggttgcagcagtaagtaatgag
tttgaactggttgatacgcaagaaatagtacatacagtagtaccaggtgagaatttgtat
agtatttctgtggaatataatgtcaaactcaatacattacgtaagtggaatgatatctcc
gaaaaaaataaaatccgcataggcgataagctctatgtggttgatcctcaaacagtgaaa
aatattaatgactaa
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