Colwellia psychrerythraea: CPS_4288
Help
Entry
CPS_4288 CDS
T00258
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPS_4288 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cps03400
]
CPS_4288 (ung)
Enzymes [BR:
cps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CPS_4288 (ung)
DNA repair and recombination proteins [BR:
cps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPS_4288 (ung)
Prokaryotic type
CPS_4288 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAZ25110
UniProt:
Q47W84
LinkDB
All DBs
Position
complement(4517517..4518194)
Genome browser
AA seq
225 aa
AA seq
DB search
MIKPQWQQLIAGEAKQSYFKNLVKEVATQRASEISIYPAEGDVFNAFNHVDLAEIKVVIL
GQDPYHGKDQAHGLAFSVQEGIKVPPSLVNIYKELATDVEGFEIPKHGCLTHWAEQGVLL
LNTVLTVQQANAHSHAKLGWETFTEQAINALNEHNDGCVFILWGAHAHKKGKNINQEKHL
VLAGPHPSPLSAYRGFFGCKHFSQANAWLAKHEVNQVDWHLPLEA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaccccaatggcagcagttaattgctggtgaagcgaagcaaagctactttaaa
aacttagtcaaagaagtcgcaacgcaaagagcatcggagatttcaatttatccagcagaa
ggtgatgtgtttaatgcttttaaccacgttgatttagcagagataaaagttgtcattctt
gggcaagatccttatcacggaaaagatcaagcacatggtttagctttttcagtgcaggag
ggcatcaaggtaccgccatcacttgttaatatttataaagaactggcgaccgatgttgaa
ggctttgaaataccaaagcatggctgtttaacacattgggcagagcaaggagtactgttg
ttaaatacggtattaacagtgcagcaagccaatgcgcattctcacgctaagctgggttgg
gagacttttaccgagcaagctattaacgcgttaaatgagcacaatgatggttgtgttttt
attttatggggagcacatgcacataagaaaggtaaaaatattaaccaagaaaaacattta
gttttagcgggtccacatccgtcgccattgtctgcttacagaggtttttttggctgtaaa
catttctctcaagctaatgcttggttagctaaacacgaggttaatcaagttgattggcat
ttacctttggaggcttag
DBGET
integrated database retrieval system
