Colwellia psychrerythraea: CPS_4361
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Entry
CPS_4361 CDS
T00258
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPS_4361 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cps03032
]
CPS_4361 (dnaB)
Enzymes [BR:
cps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CPS_4361 (dnaB)
DNA replication proteins [BR:
cps03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPS_4361 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
nSTAND3
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
AAZ25849
UniProt:
Q47W12
LinkDB
All DBs
Position
complement(4592913..4594331)
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AA seq
472 aa
AA seq
DB search
MADKKPGKFSKERQFIKDKQIDELKVPPHSLEAEQSVLGGLLLDNETWDRVAEKAVAADF
YSRSHRLIFETIGGLIELGEPVDLITLSEALENDQKLDDAGGFVYLAEMMKNTPSAANIT
AYADIVRERAVTREMISVANEIAEAGYDTQGRSSADLLDFAETKVFAIAEKRANKNEGPE
SLNSVLEKTVDRIEKLCSTPSGGVTGVPSGYADLDKMTAGLQKSDLIIVAARPSMGKTTF
AMNLAEHAAMTQEHPALIFSLEMPADQIMMRMLASLGRIDQTKIRTGQLEDEDWARLSST
MGLLMEKGKMFIDDAAGLTPTEVRSRARRIHRDHGGISMIMIDYLQLMRAPQFSDNRTLE
VAEISRSLKALAKELKVPVVALSQLNRGLEQRSDKRPINSDLRESGSIEQDADLIMFIYR
DEVYHDDSEFKGMAEIIIGKQRNGPIGRVPLTFQGKYSRFDNYAGPHVLEED
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaaagccaggtaaattttcaaaagaaagacaattcattaaagacaaacaa
atcgatgaattaaaagtacctccgcattcgctagaagctgaacaatcggttcttggcgga
ctgctacttgataatgaaacgtgggatcgagttgctgaaaaagccgttgccgctgatttt
tatagtcgctcacatcgccttatttttgaaaccattggtgggttaatcgaattaggcgaa
cctgttgatttaatcaccctgtctgaagccctagaaaacgaccaaaaacttgacgatgct
ggcggttttgtttatctcgcagagatgatgaaaaacacgccaagtgcggcaaatatcact
gcttatgctgacattgtacgtgaacgtgcagtaacccgtgaaatgatcagcgtggcgaat
gaaatcgctgaagcaggttatgatacgcaaggacgaagcagcgccgatttactcgatttt
gctgaaaccaaagtttttgcaattgctgaaaaacgagccaacaagaatgaaggccctgaa
agtcttaattcagtgttagaaaaaactgttgatagaattgaaaaactctgttcaacgcca
tcaggtggtgttaccggtgtgccgagtggttacgctgacttagataaaatgacagcaggt
ttacaaaagtctgatttgatcattgttgcagcgcgtccatcgatgggtaaaacaaccttt
gcgatgaacttggccgaacatgctgcgatgacacaagaacatcctgcacttatcttcagt
ttagaaatgcctgcagatcaaatcatgatgcgtatgctggcgtctttaggccgtattgat
caaactaaaatccgtactggtcagttagaagatgaagattgggctcgtctgtcttcaacc
atgggcttgctcatggaaaaaggcaaaatgtttattgatgatgcggcagggctaacgccg
acagaagtgcgttcaagagcgcgaagaatacatcgcgatcatggcggtattagtatgatc
atgattgattacttacaattaatgcgagcaccacaattctctgataaccgtaccttagaa
gttgctgaaatttcgcgttcactcaaagccttagctaaagaattaaaagtgcctgttgtg
gcattatctcagttaaaccgtggtttggagcaacgttcggataaacgaccaattaactca
gatttacgtgagtcaggttcaatagagcaggatgcagatttaatcatgtttatttatcgt
gatgaggtttatcacgatgacagtgaatttaaaggcatggcagagattattattggtaag
caacgtaacggaccgattggccgtgtgccattaaccttccaaggtaagtattctcgcttt
gataattatgccggaccacatgtattagaagaagactaa
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