Colwellia psychrerythraea: CPS_4492
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Entry
CPS_4492 CDS
T00258
Name
(RefSeq) putative pyridoxal-dependent decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00300
Lysine biosynthesis
cps00470
D-Amino acid metabolism
cps01100
Metabolic pathways
cps01110
Biosynthesis of secondary metabolites
cps01120
Microbial metabolism in diverse environments
cps01230
Biosynthesis of amino acids
Module
cps_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CPS_4492
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPS_4492
Enzymes [BR:
cps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CPS_4492
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Nudix_hydro
Motif
Other DBs
NCBI-ProteinID:
AAZ24236
UniProt:
Q47VN2
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All DBs
Position
complement(4736062..4737309)
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AA seq
415 aa
AA seq
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MTKSTWFDTSIENALVTHESPEDEQGYFVYQLDALKAHLAALQQQDVIKLWFAVKANPLS
KIIQTLDSEGFNFDVASSGELAQVLAQGIDPSRILNTGPAKSKKQLTAFIKQGVNTFVVE
SLNQLNWLNEAVLEQEQSLKSVEKPKVLLRVQLQWHEGEKNPLGGNSLTPFGLSVSEWQN
IHVDSYPALDLCGLHIFQWGNMLSNEKMFSLWSQMITPLTDLASSIGMTLEVLDLGGGLG
IDYLGEGQALSWSQVIEDLAIIKAKAGVKELWLELGRFAVAEYGYYVVPVVDRKMNYNQD
QLVLAAGINHLLRPAITDQPFPVQILREGFVAEDDSMQAFDLHGPLCTSMDKLGHLQLPK
DTAVGEQLVFGYCGAYGFTESMPFFLCHELAAEYVYQNGTLTQIRAALPASSYLA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatccacttggtttgacaccagcattgaaaatgccttagttacacatgaatca
ccagaagatgaacaaggctattttgtttatcaacttgatgcacttaaagcacatttagcc
gctttacagcagcaagatgtcattaaattatggtttgccgttaaagcgaatccactatcc
aaaataattcaaacattagatagtgaaggctttaactttgatgttgctagtagcggtgag
ttagctcaagttttagcgcagggaatagaccctagtcggatcttaaatactggaccagct
aaatcaaaaaaacaactgactgcatttattaagcagggcgttaatacttttgtggttgag
agtctaaatcaactgaactggttaaatgaagcagtacttgagcaggaacaatcactcaag
agtgttgaaaaaccgaaagtactactgagagttcagctgcaatggcatgaaggcgagaaa
aacccactgggtggaaatagcttaacgccctttggtctatcagtgtctgaatggcagaat
attcatgtagatagctatccagcgttggatctttgtggcttgcatattttccaatggggt
aacatgctcagtaatgaaaaaatgttttcattatggtcccaaatgataactcccttgact
gatttagctagtagcattggtatgacacttgaagtactcgatttaggtggtggtttaggt
attgattatttaggcgagggacaagctttgtcttggtctcaagttatcgaagacttggcc
attatcaaagcaaaagctggtgtcaaagaattatggcttgagttgggacgttttgcggtt
gcagagtatggctattatgtcgtgcctgttgttgatagaaaaatgaattacaaccaagat
cagttagtgttggcggcgggaataaatcatttattgcgtcctgctattactgatcaacct
tttccggtacagatactacgagaagggtttgtagctgaagacgactctatgcaagctttt
gatttgcatggccctttatgcaccagtatggataaattagggcatttacagttacctaaa
gacacggctgttggtgaacaactcgtgtttggttattgcggtgcttatggctttactgaa
agcatgccgtttttcttatgtcatgaattagcggctgaatatgtttaccaaaatggtacg
ctaactcaaatcagagcagctctgcctgcttcatcttatttggcttag
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