Chlamydia psittaci Mat116: AO9_00675
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Entry
AO9_00675 CDS
T02450
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cpsa
Chlamydia psittaci Mat116
Pathway
cpsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AO9_00675 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsa03021
]
AO9_00675 (rho)
03019 Messenger RNA biogenesis [BR:
cpsa03019
]
AO9_00675 (rho)
Transcription machinery [BR:
cpsa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AO9_00675 (rho)
Messenger RNA biogenesis [BR:
cpsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AO9_00675 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
AAA
Mor
DUF5855
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGE74706
LinkDB
All DBs
Position
137537..138922
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AA seq
461 aa
AA seq
DB search
MKEERSSEVLPKVKENRKHACPGLQEKSFAGECAVVADVVNENQPVTITKIAKLQRMGIE
ELNVLARQYGVKNIGSLTKSQVVFEIVKAKSERSDELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNERIVMEMGKEHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELEKVYLFRQAIADLTAIDAMHLLLGRLKRQIVTQSFYFL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaacgttcttcagaagtcttgccaaaggtcaaagagaatagaaaacatgcg
tgtcctgggttgcaagagaagtcttttgcgggagaatgtgcagtagttgcggatgtagtg
aatgaaaatcaacctgtaactattacaaaaattgccaaattgcaaaggatgggaattgaa
gagcttaatgtattggctcgtcaatatggagtgaagaacatcgggtctctcactaaatct
caagtggtatttgagatcgttaaagcaaagtctgaacgttcagatgagcttttaatcggg
gaaggggttttggaagttcttcctgatgggtttggctttttaagatcacctacttataac
tatctcccttctgctgaagatatttatgtttccccagctcagattcgcagatttgattta
aagaagggagacacaattataggcaccatacgttctccaaaagagaaggaaaagtatttt
gccttattaaaggtagataagattaatggatctaccccagacaaagctaaggaacgagtt
ttattcgaaaacttgacccctctataccccaatgaaagaattgttatggaaatggggaag
gagcacctcgctgaacgggtgttagatcttacggcgcccatagggaaagggcaacgggga
cttattgtagctcctccacgttctggaaagacagtaattttacagagcatagcgcacgct
attgcagtaaataatcctgatattgttctcattgttttgttaattgacgagcgcccagaa
gaagttaccgatatgattcgacaggtgcgtggtgaagttgttgcttctacgtttgatgag
cagcctgaaagacatattcaagttgcagaaatggttatagaaaaggctcgacgtctagtt
gaacacggaaaggatgtagtgattcttctcgattctattacacgtttagcgcgagcttac
aataccgtgcaaccacattctgggaagatcttaacaggaggcgtagacgcgagtgctcta
cataaacctaagagatttttcggagcagcaagaaatatcgaaggtggcggatcgttaacc
attttagctacagcgttgatagatactggttctagaatggatgaagtcattttcgaggag
ttcaaaggtacaggaaatatggaactggtactagatcgtcgcctttctgatcgaagaact
taccctgctattgatcttattaagagtggtacaagaaaagaagaattactctatcaccct
agtgaattagaaaaagtttaccttttccgacaggcaattgctgatcttactgctattgac
gctatgcatctgttgttaggtagattaaaaagacaaatagtaacgcagagtttttacttt
ctctaa
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