Chlamydia psittaci Mat116: AO9_00965
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Entry
AO9_00965 CDS
T02450
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cpsa
Chlamydia psittaci Mat116
Pathway
cpsa03410
Base excision repair
cpsa03430
Mismatch repair
cpsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AO9_00965
03430 Mismatch repair
AO9_00965
03440 Homologous recombination
AO9_00965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpsa03400
]
AO9_00965
DNA repair and recombination proteins [BR:
cpsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AO9_00965
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AO9_00965
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AO9_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
AGE74762
LinkDB
All DBs
Position
191787..193559
Genome browser
AA seq
590 aa
AA seq
DB search
MASKDNSSVSNPTWIYPKYDPALLSSIIKELHLHPVAAQTFISRGFQTVDEVRDFLYVHL
SNLHDPELLLDMSKAVQRLLLAKERGEHVMVYGDSDVDGITGVALLVEFLRSIEMKVSYC
FLGAFLKHYGEPSLLIAKMKEEGVTLLITVDCGITAGKEVSDINKQGIDVIVTDHHMPTG
KIPHCIATLNPKLRDHTYPNKDLTGVGVAFKLARGVVNALQKNNPKLKLDIKHLLDLVTL
GTVTDVGTLLGENRTMVRHGIKEIAKGSRLGLRKLCIFSGVKPSEVTSTDIVLKISPKLN
SLGRLADASKGVELLLTKDPEVADDLIQYLDKINRERQKIEADVFHDVQKILKNQPDIVK
QAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGIGKGSLRTIGSFPLLGILQKC
SPMFISYGGHDFAAGIIINEDRIEAFRKKFIHLVNSSLKKEKAVVTLPLDARADFDEIDH
DLLSSIDLFEPFGKGNPVPIFYTIVHQVRYPKLLPGNHLKLYLNYGERNLEGIAFGLGDR
IGALKASWNQPLELAYTPRLSQSANGGVIHLLVRDFRILPLNYKDTTARF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaagataattcttctgtatctaatcctacttggatatatcctaagtacgat
cccgctctactttcttctattataaaggagttacatcttcatccggttgctgcacagact
tttatttctcgaggatttcaaacggtagatgaagttcgtgattttctttatgtacatcta
tccaacctgcatgatcccgaacttttactcgacatgtcaaaagctgtacaacgtttgctt
ctcgcaaaagaacgtggtgagcatgtcatggtctatggagatagtgatgttgatgggata
acaggcgtggctcttcttgtagagtttttgagatctatagaaatgaaggttagctattgt
tttttaggagcattcctgaaacattatggcgaaccttctctgttgattgccaagatgaag
gaagaaggcgtcactttgctgattaccgtagattgcgggattactgcagggaaagaagtc
agtgatatcaataagcaaggcattgatgtcattgttacagatcatcatatgcctacaggt
aaaatccctcattgcatagcaacattaaatccaaagctcagagatcatacttatccaaat
aaagatctcactggtgtaggcgtcgcttttaaactcgcccgtggtgttgttaacgcgtta
cagaaaaacaatccaaaactcaaattagacattaagcatttattagatttagtaactcta
gggacagtgacggatgtgggaacccttttaggagagaatcgcaccatggttcgccacggc
attaaagaaatcgccaaagggtcacggttagggttgcgtaaattatgcattttttcaggg
gtaaaaccttcagaggttacctctacagatattgttttgaaaatttctccaaaactgaat
agtttaggaagacttgccgacgcttctaaaggcgttgaattgttgctgaccaaagatcca
gaagttgctgatgacctcattcaatatctcgataagatcaatagagaacgccaaaaaata
gaggctgacgtattccatgatgtacaaaaaatcttaaaaaatcagcccgatatcgttaaa
caagcagctattgtactatcgtcacaagattggcattccagagtcattcctattatttca
gcacgcctagcgaaagcttataataagcccgtagcgattatttctaatcagggagggata
gggaaaggatcgttaagaacaatagggtctttccctctccttggaatattacaaaagtgc
tctcctatgttcatatcctatggaggacatgattttgcagcaggcattatcattaatgaa
gaccgaatagaagcttttaggaaaaagttcattcatcttgtgaattcatcgttaaaaaag
gaaaaagctgtagttacccttcccttagatgctcgagctgattttgatgagatagatcac
gatttactctcttccatcgatctgttcgaaccttttggcaaaggtaatcctgtacctatc
ttttataccatagtacatcaagtacgttatccgaagttattaccagggaatcatctgaaa
ctctatcttaattacggagaaagaaacttagaaggcatagcttttggattaggggataga
ataggagctctaaaagcgagttggaatcaacctttagaactggcttatacaccacgttta
tcccaatctgctaacggaggagtcattcatttgttagtgcgtgattttcgtattcttcca
ctaaattacaaggatacaacagcaaggttttaa
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