Chlamydia psittaci Mat116: AO9_01290
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Entry
AO9_01290 CDS
T02450
Name
(GenBank) putative ribonuclease
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
cpsa
Chlamydia psittaci Mat116
Pathway
cpsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AO9_01290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpsa03019
]
AO9_01290
03016 Transfer RNA biogenesis [BR:
cpsa03016
]
AO9_01290
Enzymes [BR:
cpsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AO9_01290
Messenger RNA biogenesis [BR:
cpsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AO9_01290
Transfer RNA biogenesis [BR:
cpsa03016
]
Prokaryotic type
tRNA degradation factors
AO9_01290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AGE74827
LinkDB
All DBs
Position
complement(254072..255775)
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AA seq
567 aa
AA seq
DB search
MKRIRKKRPQSFRRNSKQILISGVLFVHGKKGFGFVTPDHPEEYPFDIFIPARDLKGALD
GDHVVVSLFPNSKEGEKRKGVIHQVISRGKTVLVGTITSLIDASTAFVCVNALGPEIPVK
AKLIPKRDYKIGDRLLLSTPVWKAKPESKEPPPLEMLEFIGNISNAKSDFPCIKAEYGIQ
EEFPEAVIEETNHFSQKHISQALRSRKDLRNLLCFTIDSITAKDFDDAVSLTYDNNDNYI
LGVHIADVSHYVTPHSALDQEASKRCNSIYFPGKVIPMLPPALSDNLCSLKPNVDRLAVS
VFMTFTKSGHLSDYEIFRSVIRSKYRMTYDEVDEIVENKQPHPIAKTLLAMAELSEKFSD
IREKRGCIRLVLPSFTMSLDNLQEPVTLIETRQTLSHKLIEEFMLKANEVVAYHISHQGV
SLPFRIHESPNDESLLSFQEIAKAMGFDIIMTPAQEPDFQYLLQESSAGHPLEPILHSQF
VRSMKTASYSTENKGHYGLKLDFYTHFTSPIRRYIDLIVHRLLFNPMSIEETRLEHIVRA
CSTQERIAAKSEFAFETLKKIVFYISS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagaatcagaaaaaaacgaccacaaagctttagaagaaactcgaaacaaatatta
atttccggcgtcctatttgttcatggaaaaaaaggtttcggttttgttacacccgaccac
ccagaagaatatccttttgatatttttattcccgcaagagatcttaaaggagccttagat
ggagatcacgttgtcgtctctcttttccccaattctaaagaaggagaaaaaagaaaagga
gtcattcaccaagtcatctctagaggcaaaactgttcttgtaggaacaataacctcactc
attgacgcctcaacagcgttcgtctgtgtgaatgctttgggcccagaaatccctgtaaaa
gcaaaacttattcctaaacgtgattataaaatcggcgatcgtttactactcagtactcct
gtatggaaggcaaaacctgaatccaaagaaccccctccgttggaaatgctcgaatttatt
gggaatatctccaacgctaagtccgattttccctgcataaaagctgaatatgggattcaa
gaagaattcccagaagctgttatcgaagaaacgaaccatttctcacaaaaacacattagc
caagcactaagatcacgaaaagatcttcgcaatctcctatgctttactattgactcaata
actgcaaaagacttcgatgatgccgtatccttaacctatgacaataacgataattacatc
cttggcgtccatattgcggatgtctcccactacgtaacacctcactccgctctagatcaa
gaagcaagcaaaagatgtaattctatctactttcctgggaaagtgattcctatgctcccc
cccgctctttcggataatctctgcagtttaaaacctaacgtcgatagactcgccgtttct
gtgttcatgacgtttacaaaatccggtcatttatccgattacgaaatattccgtagtgta
atccgtagtaaatatcgcatgacctatgatgaagtggacgagatcgtagaaaataaacaa
ccccaccctatagcaaaaactcttctcgctatggctgaactcagcgaaaaattctctgat
attagagaaaaacgtgggtgcatacgtcttgttcttccttcattcaccatgtctctagat
aacctacaagaacctgtaactcttatagaaacacgacaaacgctatcacataaactcatc
gaagagtttatgctcaaagctaatgaagtcgttgcttatcatatttcccaccaaggcgtt
tctctgccatttagaatccatgaatctcctaatgatgagagtttgctctctttccaagag
atcgccaaagctatgggatttgatattatcatgaccccagctcaagaacctgattttcaa
tacctattacaagagagctctgcaggacatcctctagagcccattctacattcacaattt
gttcgtagtatgaaaaccgcctcatactcaaccgaaaataaaggtcattatggtcttaaa
ttggatttctatacccacttcaccagccccatccgtcgctatatcgatcttattgttcat
agactcctcttcaaccccatgtctatagaagaaacccgtctagaacatattgtaagagca
tgctctactcaagagcgtatagccgcaaaatctgaatttgcttttgaaacccttaaaaaa
atcgttttttacataagttcttaa
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