Chlamydia psittaci 84/55: B595_0796
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Entry
B595_0796 CDS
T02308
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cpsb
Chlamydia psittaci 84/55
Pathway
cpsb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpsb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B595_0796 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsb03021
]
B595_0796 (rpoB)
03400 DNA repair and recombination proteins [BR:
cpsb03400
]
B595_0796 (rpoB)
Enzymes [BR:
cpsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B595_0796 (rpoB)
Transcription machinery [BR:
cpsb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B595_0796 (rpoB)
DNA repair and recombination proteins [BR:
cpsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B595_0796 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AFS19755
LinkDB
All DBs
Position
complement(798005..801022)
Genome browser
AA seq
1005 aa
AA seq
DB search
MVYGKAGEKLSTAMLKRMLDANISTLKIAVEADENHPIIKMLAKDPTDSYEAALKDFYRR
LRPGEPATLANARSTIMRLFFDPKRYNLGRVGRYKLNRKLGFPMDEESLAQVTLRKEDVI
GALKYLIRLKMGDEKASIDDIDHLANRRVRSVGELIQNQCRSGLARMEKIIRERMNLFDF
SSDTLIPGKIISAKGLASVLKDFFGRSQLSQFMDQTNPVAELTHKRRLSALGPGGLNRER
AGFEVRDVHASHYGRICPIETPEGPNIGLITSLSSFAKINEFGFIETPYRIVRGGVVTDE
IEYMTADVEEECVIAQASANLDEYNMFVDPVCWARYRGEAFEADTSTVTHMDVSPKQLVS
IVTGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPIVGTGLEARAAKDSGAIVVAEEDG
VVEYVDGYKVVIAAKHNPTLKRTYDLKKFLRSNSGTCINQRPLCSVGDVVVKGDVIADGP
ATDKGELALGKNILVAFMPWYGYNFEDAIIISEKLIKQDAYTSIYIEEFELTARDTKLGK
EEITRDIPNVSEEVLANLGEDGIIRIGAEVKPGDILVGKITPKSETELAPEERLLRAIFG
EKAADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEEAVHLKDLQKGYKNQISV
LKTEYREKLGALLLNEKAPASIIHRRTADILVQEGTVFDQETIELLEQESLVDLLMPPCD
MYDVLKSLLSDYETSLQRLEVNYKTEVEHIREGDADLDHGVIRQVKVYVASKRKLQVGDK
MAGRHGNKGVVSKIVPEADMPYLANGETVQMILNPLGVPSRMNLGQVLETHLGYAAKTAG
IHVKTPVFEGFPESRIWDMMIEQGLPADGKSYLYDGKTGERFDNTVVIGYIYMLKLSHLI
ADKIHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYGVAHMLQEILTVKSDDVT
GRTRIYESIVKGENLLKSGTPESFNVLIKEMQGLGLDVRPMVVDA
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
ttggtttacggaaaggctggagaaaaacttagcacagctatgttaaaacgtatgctcgat
gctaatatctcgactttaaaaatagctgtagaggctgatgaaaatcaccctatcatcaaa
atgttggccaaagatccaacagactcttatgaagctgctttaaaggatttctatagaaga
ttgcgccccggtgagcctgcgaccttggcaaatgctcgttctacaattatgcgtctgttc
tttgatcctaaacgctataacttaggaagagtaggtcgttataaattaaatagaaaactt
gggttccccatggatgaagagtccttagcacaagtgaccttaagaaaagaagatgttatt
ggtgctctgaagtatcttatccgtttaaaaatgggtgatgaaaaagcttcgattgatgat
atcgaccatttagctaaccgtcgtgtacgctctgtaggagaacttatccaaaaccaatgc
cgctccggattggctagaatggaaaaaattatccgagagagaatgaatttatttgatttc
tcttctgatacattgattccaggaaaaattatctctgcaaaaggtctcgcaagcgttcta
aaggactttttcggtcgttctcagctttctcaattcatggatcaaacgaaccctgtggcc
gaattaacacataagcggcgtttgtcagctttggggcctggaggtttgaatagagaaaga
gctggatttgaagttcgtgacgtgcatgcgagccattacggacgtatatgtccaattgag
actccagaaggaccaaacattggtttgattacttctctatcttcctttgcaaaaattaac
gaattcggattcattgaaactccttatcgtatcgttagaggtggggtagttactgatgaa
atcgaatacatgactgctgatgtcgaagaagaatgtgtgattgctcaggcttcagcgaat
ttagatgaatataatatgtttgtcgatcctgtatgctgggcaagatatcgtggagaggct
tttgaagcagacacaagtaccgttacgcatatggacgtttctccaaagcaattggtatcg
attgttacaggtttaattccatttttagagcatgacgatgctaaccgtgctcttatggga
tcaaacatgcaacgtcaagctgttcctttattgaaaactgaagctcctattgttggaaca
ggtttagaagcacgtgctgctaaagattccggtgctattgttgttgctgaagaagacgga
gtcgtagaatatgttgacggttataaagtagttattgcagctaaacataacccaacactt
aaacgcacttacgatcttaaaaagttcttaagatcaaactctggtacctgcattaatcaa
cggcctttatgtagtgtgggagatgttgtagtcaaaggtgatgttatagctgatggtcct
gctacagataagggagaacttgctttaggaaagaacatcttggttgccttcatgccttgg
tatggatataacttcgaagatgcgattatcatttctgaaaagttgattaagcaagacgct
tatacctcaatttatattgaagagtttgaattaacagctagagacacaaaattaggaaaa
gaagagattactcgtgacattcctaacgtttctgaagaagtcttggctaacttaggtgaa
gatggaattattcgtattggagctgaagtaaagcctggcgacattcttgttggtaaaatt
actccgaaatcagaaacagaattagctcctgaagaacgtttattacgagcaatcttcgga
gagaaagctgctgatgttaaagacgcttctttgactgtacctccaggaacagagggagtt
gtcatggacgtgaaagtcttcagtagaaaagatagactttctaagagtgatgacgagctt
gtagaagaagctgttcatttgaaagacctacagaaaggttacaagaatcagatttcagta
ttaaaaacagagtatcgtgaaaaattaggagctctattgttaaatgaaaaagctccagct
tcgattatacatcgtcgtactgccgatattctggttcaagaaggtactgtatttgatcaa
gagacaatcgaattgcttgagcaagagtctttggtcgatctccttatgcctccttgcgat
atgtatgatgttttaaaatcactactttctgattacgagacatccttgcaacgtttggaa
gtcaattataaaacagaagttgaacatattcgtgaaggtgatgctgatcttgatcacggt
gtgatccgccaggttaaagtatatgttgcttcaaaaagaaagctgcaggttggagataaa
atggctggacgtcacggaaacaaaggagttgtttctaagattgttcctgaagctgatatg
ccataccttgctaacggcgaaactgtacagatgatcttaaacccccttggtgtgccttct
aggatgaacttaggtcaggtattggaaactcatcttggttacgctgcaaaaactgccggt
attcatgtaaaaactccagtatttgaaggtttcccagaatctcgtatctgggacatgatg
atagaacaaggtttgcctgcagatggtaagtcttacttgtatgatggaaagactggagag
agattcgacaatactgtggtaatcggatacatttacatgttgaagctaagccacttaatt
gcagataaaattcacgccagatccattggtccttactccttggtcactcagcaacctctc
ggaggtaaagctcaaatgggaggtcaaagattcggagagatggaagtttgggctttagaa
gcttatggggtagctcatatgctccaagagattcttacagttaaatcggatgacgttact
ggtcgaacaaggatttatgaatccattgttaaaggagaaaacctcctgaagtcaggaacg
ccagagtcgtttaatgttttaattaaggaaatgcaaggtctaggacttgatgttcgtcct
atggtagtagatgcttaa
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