Chlamydia psittaci 01DC12: BN356_0071
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Entry
BN356_0071 CDS
T02343
Name
(GenBank) putative UvrD/REP helicase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cpsd
Chlamydia psittaci 01DC12
Pathway
cpsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN356_0071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpsd03400
]
BN356_0071
Enzymes [BR:
cpsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BN356_0071
DNA repair and recombination proteins [BR:
cpsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN356_0071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_22
AAA_30
AAA_11
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CCO01533
LinkDB
All DBs
Position
complement(7915..11052)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPFDIFHPGTSIQGKYFLEASAGTGKTFTIEQIVLRALLEGSVSHVENILVVTFTNAAT
NELKLRIQENLKQAASQLKSAITHPEHSLPPYLSPPCDVKQLYMQVRNALASIDRMAIFT
IHGFCNYVLQQHFPEMQISQKNSALTHSQAVLHHIRKYLSQDLWENVLFPEQFYLLAARY
NSNSKHTSFLTDKLLSSYTVQTFDHLPSKSTTTSLLNTWHSSIRSKIKDIPKENFLEQAL
KYTESFKKQPFSITEDLLSFVDHLYSSETSVRLLSFSKIAETFHPKNRLARYQPCHAFSY
IEETSWFQDTEQFCNVDSIFNTLLHDLQLYLKNHYTWWLSPDESIVTLEELLRSSQAEEV
MKSLRKRFQLILIDEFQDTDRKQWNVFAKLFAHNDFSGSLFLIGDPKQSIYEWRNADLVT
YLKAKSTFPKTSQLHLINNYRSTPQLMQAINILFCKCSPFLEIPGYEPIEYHSLTPQSSE
YFDNSQHAPIHFFSYDNVLDQAAWISQTASHLQATHGISFGRMAILVSDSAQAFDLITHC
SIPVSFSKNKSIFHLTETYLLTIAWLEAILYPENYEKIQRVLLSSLFRHDLTDILEKKEH
YSSYFFSLRSYIFDHGLLATFYHFMTLHGEALLKTPQGDLTFQEMERLCAYLGTLSSQPQ
HQLLYLQYFSETGRWEENLSFSSYSEDTEILKITTIHASKGLEYDVVFCPGLDKSKKNKS
SSEWIREMYVACTRAKKQLFIPFQTSLNSRRNTALTNYVKQEGSYASILDLAQNLSKEHP
SLFSLSTTHRQDPSTEPIYHLTPPSTFVLSPYPTKQIFSFSSVKTMLDNEVLVDSDIENP
SISSALPRGRKTGIIIHKILENISPNFKIPISKILTTVSHFVKNTHLGGYEEMIAQKLFS
TISSPLSFTSASFALKDVCPDKILSEEAFLFSNKEQLWQGAIDLFFEYNGKYYIIDWKTS
FLGETTSKYSQENLFAYIKEHNLDYQGAIYIHAAKRFLQQFDITSDVEMGFVFIRGIDSE
GNGFLCLPNYKTSNPTIDQKYPVYH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtttgatatttttcatcctggaacatctatccaagggaaatattttctagaa
gcttctgcgggcactggaaagacatttaccatcgaacaaattgttttacgtgctctttta
gaaggttctgtttcccatgttgaaaatattcttgttgtaacatttacgaatgccgctact
aatgagttaaaacttaggattcaagagaacctcaaacaagctgcatcgcagttaaaatct
gccattacacaccccgagcactctttgcctccttacttatcccctccctgtgatgtaaag
cagctttacatgcaggtgcgtaatgctttagcttcgatagatcgtatggcaatttttacc
atccacgggttttgtaattacgttttgcaacagcattttccagaaatgcaaatctcgcaa
aaaaactcggctcttacgcactcacaagcggttttacatcatattcgtaagtatttatcc
caagatctttgggagaacgtcttatttcctgaacaattttacttacttgcggcacgctat
aactctaattccaaacacacatcttttttgacagataagttactttcaagttacacagtc
cagacttttgatcacctaccatctaaaagcaccaccacatccttattaaacacttggcat
agctctattcgatctaaaatcaaagatatccctaaagaaaacttcttagaacaagctctt
aaatatacggagagtttcaaaaaacagcctttctctataactgaggaccttctatctttt
gtagatcatttatattcttcagaaacatcagtgcgcctgctttctttttctaagatagca
gaaactttccatcccaaaaatcgtttagcacgttatcaaccttgtcacgcttttagctat
atagaagaaacatcatggtttcaagataccgagcaattttgcaatgtagacagtattttc
aacaccttgcttcacgacttacaattgtatttaaaaaaccactacacttggtggctatct
ccagatgaaagcattgtcacactagaagagctgctgcgctcttctcaagctgaagaagtg
atgaaatccctaagaaagcgattccagctcatattaatcgatgaatttcaagatacggat
aggaaacaatggaatgtttttgcaaaactatttgctcacaatgatttctctggatcccta
tttctaataggtgatcccaaacaatcgatttatgaatggagaaatgctgatctcgttacc
tatttaaaagcaaaatctacatttcctaaaacgtcacagctgcatcttatcaacaactac
cgttctacaccacagttgatgcaggccatcaatattctcttctgtaaatgttctcctttt
ctagaaattcctggttatgaacctatagaatatcattccttaaccccacagagttcagag
tattttgataactcccaacatgcgcctattcacttcttttcttatgacaatgttcttgac
caagctgcgtggatatctcaaacagcttcacatttacaagctactcatggaatctctttt
ggacgcatggcaattttagtatcggattcggctcaagcattcgatttaataacccactgc
agtattcctgtatcattttctaaaaataaatcgatatttcatcttactgaaacatatcta
ttaaccatagcttggctagaggctatcctctatccagaaaactatgaaaaaatacaaagg
gttttactgagtagcctatttcgacatgacctcaccgatattctagagaaaaaagaacac
tactcctcttattttttctctctacgcagttatatttttgatcatgggcttttagctaca
ttttatcatttcatgactcttcatggagaagctttactcaaaactcctcaaggagacctg
actttccaagaaatggaaaggctttgtgcatacttaggaacgctttcttcacaacctcaa
caccaacttctctatttgcaatatttctcagagacaggacgttgggaagaaaacctgtcg
ttttcatcttattccgaagacacagaaatcctaaaaatcacgacaattcacgcatctaag
ggattggaatatgatgttgttttttgcccaggactagataaatcaaaaaaaaataaaagt
tcttcagaatggataagagaaatgtacgtagcgtgtactcgagctaaaaaacaactcttt
atccctttccaaacttctttaaattcaagacgcaataccgctcttacaaactatgtaaag
caggagggatcgtatgcatctatcctcgatctcgcccaaaatttatccaaagagcatccc
tccttattttctttatcaaccacacacagacaggatccatccactgagcctatttatcac
cttaccccaccttcaacttttgtgttatcgccctatcctacaaaacagattttctctttc
tcctctgtaaaaacgatgttagataacgaagtgcttgtagatagtgacattgagaaccct
tcgatctcttcagcacttcctagaggaagaaaaacgggtattatcattcataaaatccta
gagaatatatctccaaattttaaaattcccatttctaaaatcttaactacagtctcacac
ttcgtgaaaaacactcatttaggggggtatgaagaaatgatcgcacaaaagcttttctca
actatttcttcaccgctatcttttacctccgcatcctttgccttaaaagatgtctgccct
gacaaaatacttagtgaagaagcctttctcttttctaataaagaacagttgtggcaggga
gcaattgacctatttttcgagtataatggcaagtattacattatagattggaaaacatcc
ttcttaggagaaactacctcaaaatattctcaagaaaatctctttgcttacatcaaagag
cataacctggattatcaaggtgccatttacatccatgcagcaaaacgctttttacaacaa
tttgatattaccagtgacgtagaaatgggatttgtatttattcgaggtatcgattctgaa
ggaaacggctttttgtgcttaccaaactacaaaacatctaatcccacaatagaccaaaaa
tatccggtctatcattag
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integrated database retrieval system
