Corynebacterium pseudotuberculosis 48252: CPTA_01095
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Entry
CPTA_01095 CDS
T03482
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA, actinomycete-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpse
Corynebacterium pseudotuberculosis 48252
Pathway
cpse03420
Nucleotide excision repair
cpse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPTA_01095
03430 Mismatch repair
CPTA_01095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpse03400
]
CPTA_01095
Enzymes [BR:
cpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPTA_01095
DNA repair and recombination proteins [BR:
cpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPTA_01095
MMR (mismatch excision repair)
Other MMR factors
CPTA_01095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ADDB_N
AAA_11
HHH
DUF6011
Helicase_Sgs1
DZR
Motif
Other DBs
NCBI-ProteinID:
AIG06924
LinkDB
All DBs
Position
1118955..1121006
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AA seq
683 aa
AA seq
DB search
MIDLNELDSDQRAAASAPRGPVAILAGAGTGKTRTITYRIANLIDRGMASPNRVLAVTFT
RRAAGEMRHRLGVMGVGGVQAQTFHSAAMRQLSYFWPQVAGNLPWKLLDNKFPLVGKAAR
SVGIETTTENVRDLLGEIEWAKATLITPDRYVEHVKDRKIPAAADKIAQVYRRYEQAKTT
SEGMLLDFDDLLLHTAGAIENSTAIAEEFREQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DITVVGDANQTIYSFTGATPNYLLGFSRKYPHATVVKLQRDYRSTPQVTDLANTVIGKAR
GRVAGTRLQLEGMRPPGPDPEFCTFDDEPAEARAVASRIKELLDKGVAASEIAVLYRINA
QSAVFEQALADAGIVYQVRGGGEFFQRAEIRQAMSQLVRVAQRTGTESIRGSALETLVRS
SLAPLGLTPEEPEGTQARERWQSLDALAELTVELTQATPDLDIQGLLEQLNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPITHALKGGEPHIEEERRLFYVGVTRARE
HLVCSWAKARQEGGRATRKRSRFFDGIVEEPIHAAVPPRTKRSRRCRVCGSPLSTSAENV
MGRCVDCPSGVGEEVFETLKAWRLDMAKEGGVPAYIVFTDATLHAIAEACPTTTDELLKI
SGIGQMKAEKYGSSLLEVLAQFH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctcaacgagctggatagcgatcaaagggccgccgctagcgccccgcgggga
ccagtagctatcctcgcgggcgcgggtacaggtaagactcgaacgattacctatcggatt
gccaatcttattgaccgcggcatggctagccccaaccgcgtacttgcagtgacgtttacg
cgtcgcgctgcgggggaaatgcggcaccgactgggagttatgggggtcgggggtgttcag
gcgcagacctttcactcagctgcgatgcgacaactatcgtatttttggccgcaagtggcg
gggaatcttccctggaaactgttggataacaagtttccgctcgttggcaaagcagcgcgc
tcggtaggcatagagacgacgacggaaaacgttagggatcttttaggcgagattgagtgg
gcaaaggctacgttaataacgccggaccgttatgtggagcatgtgaaggatcggaagatt
cccgcggccgcagataaaattgcccaggtatatcgcaggtatgagcaggctaaaacaacg
agtgaaggcatgcttctggattttgatgatcttttattgcacacggcaggggccattgag
aattcgactgctatcgcagaggaatttcgggagcagtatcgcacttttgtagtcgacgag
taccaggacgttacgcccctgcaacagagagtgctggatgcgtggctcggtgagcgtgac
gatatcactgtggtgggagacgccaatcagactatttattcttttacgggagcaactcct
aattatcttttggggttttctcgtaaataccctcatgcgaccgtagtcaaactacagcga
gattataggtcgaccccccaagtgacggaccttgccaatacggtcattgggaaggctcgg
ggtcgggtagctggtacccggcttcaattggaaggaatgcgccctcccggtccggatccg
gaattctgcactttcgacgatgaaccggctgaggctcgcgccgtagctagtaggattaaa
gaactcttagacaagggggttgcagcgtcggaaatcgcggtgctttatcgcatcaacgcg
caatcggcggtttttgagcaggcccttgcagatgccgggatcgtttaccaggtgcgtggt
ggcggcgagtttttccagcgcgcggagattcgccaggcaatgtcgcagcttgttcgcgtg
gcccagcgcacgggaacggaatcgatccgaggctctgccctggagaccttggtacgctcg
tcgctagcacctttggggttaaccccggaagaaccggaaggaacgcaggctcgcgaacgg
tggcagtccctagatgcccttgcagagctcactgtagagctgactcaagctacaccggat
ttggatatccaaggactcctagaacagctcaatcagcgtgcaagcgcaaagcacccaccg
acgatgcaaggcgtgactttagcgtctctgcatgcggctaaaggcttggaatgggatgcg
gtgttccttgtggggcttgtagacggcacgcttccgatcactcatgcgctcaaaggaggg
gagccccatattgaagaggaacgcaggcttttctatgtcggcgtcacccgtgcccgggaa
caccttgtgtgctcgtgggcaaaagctcggcaggaaggaggccgtgcaacgcgcaagcga
agccgattttttgacggcatcgtggaagaacctatccatgccgcagtcccgccgcgtacc
aagcgatcacggcgctgtcgtgtctgtggctcgcccttgagcacgtctgcagaaaacgtg
atgggaaggtgcgttgattgcccatcgggcgtgggcgaggaggtatttgagactctgaag
gcgtggcgtctagacatggccaaagaggggggcgtacctgcttatatagtctttacagac
gcgaccctgcacgctattgctgaggcctgcccgacgaccaccgatgagctactaaaaatt
tcgggtatcgggcagatgaaagcggagaagtatggcagtagcttgctagaagttttggcc
caatttcactga
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