| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase beta' subunit
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| KO |
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| Organism |
cpsf Corynebacterium pseudotuberculosis Ft_2193/67
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cpsf00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPTC_00340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cpsf03021]
CPTC_00340
03400 DNA repair and recombination proteins [BR:cpsf03400]
CPTC_00340
Enzymes [BR:cpsf01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPTC_00340
Transcription machinery [BR:cpsf03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPTC_00340
DNA repair and recombination proteins [BR:cpsf03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPTC_00340
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(332163..336173)
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| AA seq |
1336 aa
MIDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITGVDEEARHSDQTTLEAEMLLEKKDVEADAESEIAERAQKLEED
LAELEAAGAKADARNKVQKAADKEMQHIRERAEREIDRLEEIWQTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELREIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKTEGEIGGQ
GAYQPATEDGPATGVYSSYAEALMARDRGVLGLQAKIRVRISHLRPPVEVEAEQFPEGWE
QGQTWLADTTLGRIMFNELLPWNYPYLEGVMVRKGGGSNKILLGDVINDLAATYPMITVA
QTMDKMKDAGFYWATRSGVTITMSDVLVLPNKEEILDRYEAEAAKIERKYWEQGALTERE
RYDRLVELWKEATDEVGNAVEKLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTKQGIRVPVAVEVKDAQGNVTGYTGHSLIETSVAGRVASVDIKDSEGNVLVPAGENL
TDQLIEKLIAAGVAEVKVRSVLTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVHLEDEGNFYTL
TINPDDGSDVVVYEKLSKRQGLATVRVPMESNPGAMIERTLSEGDHVNVGDRLLRGPADP
HDVLEVLGRRGVEQHLVDEVQDVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGATEFLPG
TLVDLSEAKAANAEAIAAGGHPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDKLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDSY
GEFTGASVPLDEAYDL |
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| NT seq |
4011 nt +upstreamnt +downstreamnt
gtgatcgacgtcaacttcttcgacgagctccgcatcggcctggctactgccgacgacatt
cgtcgttggtccaaaggcgaggtcaaaaagccggagaccatcaactaccgcaccctgaag
ccggagaaggacggcctcttctgcgagcgaattttcggcccaacccgcgactgggagtgc
gcttgcggtaagtacaagcgtgtccgttacaagggcatcatctgtgagcgctgtggcgtt
gaggtgaccaagtccaaggttcgccgtgaacgcatgggccacatcgaactggctgcgccc
gtcacccacatttggtacttcaagggtgtcccgtctcgtctcggttaccttttggacctg
gctccaaaggatctcgagcgcatcatttacttcgcagccaacatcatcactggtgttgac
gaggaagctcgccacagcgaccagaccactcttgaggcagaaatgcttttggagaagaaa
gacgttgaggctgacgcagagtctgagatcgcagagcgcgctcagaagctggaagaggac
cttgccgagctggaagccgcaggcgctaaggccgatgcccgcaacaaggtgcaaaaggct
gcagataaagagatgcagcacatccgcgagcgggctgagcgcgagatcgatcgtcttgag
gagatctggcagacctttatcaagcttgctcctaagcagatgatcattgatgagaccatc
tatgaagagctcgtggatcgttacgaggattacttcaccggtggtatgggcgcggaggcc
atccaaacccttatccgcaactttgacctcgatgctgaggcagaggaactgcgcgagatc
atcaacaatggcaaaggccagaagaagatgcgtgccctcaagcgactcaaggttgttgct
gcattccagcgctcgggcaatgacccagctggtatggtgctcgactgcatcccggtgatc
ccaccggagctgcgtccgatggttcagctcgatggtggccgttttgctacctccgacctg
aacgatctctaccgtcgcgtgattaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggtgctcccgagatcatcgtgaacaacgagaagcgtatgttgcaggagtccgtcgacgcg
ctctttgataatggtcgccgtggtcgtccggtcaccggtcctggcaaccgtccgctgaag
tccttgagcgatttgcttaagggcaagcagggtcgtttccgtcagaacttgctgggtaag
cgtgtcgactactctggtcgttccgttattatcgtcggtccacagctgaagctgcatgag
tgcggtcttccaaagctcatggctcttgagctcttcaagccgtttgttatgaagcgcctt
gtggaaaacgattacgcgcagaacatcaagtcggctaagcgcatggttgagcgtcagcgc
cctgaggtgtgggacgttctagaagaggcaatttctgagcatcctgtgatgcttaaccgt
gcacctaccctgcaccgcctaggcatccaggccttcgagcctaagctcgttgagggtaaa
gctatccagctgcacccactcgcgtgtgaggccttcaacgctgacttcgacggtgaccag
atggctgtgcacttgccgctatctgctgaagcacaggccgaggcgcgcatcctcatgctt
gcctccaacaacattctctccccggcatccggtaagccacttgccatgccgcgtctggac
atggtgactggtctttattacctcaccatggacaagactgagggtgaaattggtggtcag
ggtgcataccagcctgctactgaggatggtccagcaacgggtgtgtactcctcctacgct
gaggcacttatggctcgcgaccgtggcgttcttggcctgcaggccaagatccgggtacgc
attagccatctgcgtccgccggtagaggttgaggcagagcagttcccagagggttgggag
cagggacaaacctggttggctgataccactcttggccgcatcatgttcaacgagctcttg
ccgtggaactacccgtaccttgagggcgttatggtccgtaagggtggaggatcgaacaag
attctcttgggcgacgtgattaatgatctcgctgcgacctatccaatgattactgttgct
cagacgatggacaagatgaaggacgccggtttctactgggcaacccgaagcggcgtgacc
atcactatgtctgacgtgctcgttcttcctaataaggaagaaattcttgaccgctatgag
gccgaggctgcaaagatcgagcggaagtactgggagcagggtgctctgacagagcgcgag
cgctacgaccgtctggtcgagctttggaaggaggctaccgacgaggtcggtaatgccgtc
gagaagctctatccggatgacaacccgattcctatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggacgctggctggcatgaagggcatggttgtgaactcaaagggt
gattacatcacccgaccgattaagacctccttccgtgaaggcctgtcggttcttgagtac
ttcaacaactctcacggttcgcgtaagggcctcgccgataccgctctgcgtaccgccgac
tcgggttacctcactcgtcgtctggtggacgttgcgcaggatgttatcgtccgcgaggat
gactgcggcaccaagcagggcattcgtgtcccagtggccgttgaggttaaggatgctcag
ggcaacgtcaccggttacaccggacacagcctcatcgagacctctgttgctggccgcgtg
gcttccgttgacatcaaggattccgagggcaacgttctggtaccagctggtgaaaacctc
accgatcagctcatcgagaagctcatcgccgcaggcgttgccgaggtcaaggttcgctcc
gtgcttacctgccagaccccgaccggtgtgtgcgctaagtgctatggcaagtccatggct
accggcaagctcgttgatatcggagaggcagtgggcatcgtcgctgctcagtccattggt
gagcccggtacccagctgacaatgcgtacgttccaccagggtggcgtcggtggtgacatc
accggtggtcttcctcgtgtccaggagctcttcgaggctcgtgttcctaagaatcgcgct
ccgattgcttctgtggcaggtaccgtacaccttgaggatgaaggtaacttctacaccctc
accatcaacccagacgatgggtcagatgttgtggtctacgagaagctctccaagcgtcag
ggtcttgctaccgtgcgggttcctatggaatccaacccgggcgccatgatcgagcgcacc
ttgtcagaaggcgaccacgtgaacgtgggcgaccgtctgctacgcggacctgctgatccg
cacgacgtgcttgaggttcttggccgccgtggtgttgagcagcacctcgtggacgaggtt
caggacgtgtaccgcgcacagggtgtggctatccacgataagcacatcgagatcatcatt
cgtcagatgctgcgccgcggcaccgtcatcgagtccggcgcgacagagttccttccgggt
actctcgttgacctttcggaggccaaggccgctaacgctgaggctattgctgctggtgga
catcccgctgagctccgttcggagatcatgggtatcaccaaggcgtcgttggctaccgag
tcgtggctgtccgctgcgtccttccaggagaccacacgcgtgcttaccgacgccgccatt
aacaagcggtccgataagctgatcggcctcaaggagaacgtgatcatcggtaagctgatc
ccggcgggtaccggtatttcccgttaccgcaacatctccgtcaaaccgactgaggcagct
cgcaatgcggcttactcaatcccaacgtatggagattccatctatggcgatgacagctac
ggtgaattcaccggcgcttccgtgccactggatgaggcctacgatctctaa |
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