KEGG   Corynebacterium pseudotuberculosis Ft_2193/67: CPTC_01177
Entry
CPTC_01177        CDS       T03484                                 
Name
(GenBank) putative ATP-dependent helicase lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cpsf  Corynebacterium pseudotuberculosis Ft_2193/67
Brite
KEGG Orthology (KO) [BR:cpsf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpsf03400]
    CPTC_01177
Enzymes [BR:cpsf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CPTC_01177
    5.6.2.6  RNA 3'-5' helicase
     CPTC_01177
DNA repair and recombination proteins [BR:cpsf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CPTC_01177
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH3_Lhr WH4_Lhr Helicase_C WH2_Lhr AlkZ-like ResIII AAA_25 DUF6406
Other DBs
NCBI-ProteinID: AIG11465
LinkDB
Position
1207706..1212730
AA seq 1674 aa
MSLDEHHEQPRSYQLQTSYAAAYPGSARPSSAHQDSACSGFARGGSAEQASVLSRFNPQI
ATWFAEVFAEPTPVQKAAWEKISLGGNTLIVAPTGSGKTLAAFLWAINGLSVASGQTVAF
PAPKNKPLAGKETNQGVKVLYISPLKALGVDVENNLRAPLTGINHVAARLGLEYSDISVA
VRSGDTPAAERARQVRKPPDILITTPESAYLMLTSKAGAILKNVETVIVDEIHAVAGTKR
GAHLSLTLERLERLAGRTIQRVGLSATARPIDAVAHFLAGDRPVDIVNPRIDKQWELSVR
VPVADMSDGTTTRSDSTAGEATYNGAHNLGSVLSDLPDTELLSESALPTQGSIWPFIEER
VYHDVMTHRSTLIFVNSRRTAERLTSRLNEIYAEEHDPESLSPQLRRTPAQLMKASDVAG
LAPTVIARAHHGSVSKDERAETERMLKEGSLRAVVATSSLELGIDMGAVELVVQVESPPS
VASGLQRVGRAGHMVGALSKGVFYPKHRADLIQTAVVVGRMDEGAIEELKVPRNALDVLL
QQTVAAVSVEDLDVEEWYATVVRAYPYRDLSRSVFDAVIDLASGVYPSTDFAELRPRVVF
DRITGRLTARPGAQRVAVTSGGTIPDRGMFGVFLAVQTGTGSVPRRVGELDEEMVYESRV
GDVFTLGASSWRIEEITRDQVLVIPAPGHTGRLPFWTGDQVGRLAELGKALGEFRRRTLA
RCQSLEDNAKENHGGDLLELEELGLDAFARQNLVQFLHDQQEATGIVPDEKTLVLERFHD
ELGDWRIVLHTPYGRGVNAAWALAVGARISERTGIDAQAVASDDGIVLRLPESDEEPGAD
LFMIDPDDIEALVAEQVGNSALFASRFRECAARALLLPRRDPGKRAPLWQQRQRAAQLLD
VARKYPSFPIILETVRECLQDVYDLPALVELLQEIKQRRIRIAEVVTSQPSPFAASILFS
YTGAFMYEGDSPLAEKRAAALSLDPALLASLLGTVELRDLLDPEIIAEVHDTMQRKAPHR
RAKTTEELVDALRVLGPVPLSDLPAITEPPMNREQVMAQLRGRVMEVRIAGVSHLAQTLD
APLLRDALGIPIPPGVAAQVETITDALEQLVSRWVRVRGPFTLMDVQHSFGLAAGIAHGV
VEKLCAQSKLVAGRFRQDSDVQEYVATEVLKIIRARSLAAVREQTQPVSHAAFGRFLPEW
QHVASVGETPELAGPDGVFNVVEQLAGVRLPASAWETLVLPQRVRNYSPLDLDELTNNGE
VIVVGAGRAGAHDPWVMLLPTDYAAELIPHVDIETLSETQQKIMAVLSRGGGFLFSDIYR
ETVSEHETSPEQSFVPELGSALWDLFEAGLVSPDGFAPIRARLAAHSGTKTAHRTSRRPN
RSRIRMGRTSFAHSHRLAQPPDVIGRWATTAAAEDNATARSVAHGEAWLDRYGVVTRGAV
VSEDVVGGFALAYKVLSGFEESGKALRGYLIEGLGAAQFSTSAVIDRLRGLADTPDIAGW
PSGASSPRVYVLAAADPANPYGAALPWPEPGPTRAAGAVVVLIDGLLAAHLTRGGRNLTL
FSPPTGVEQQEFLGIVLGALAESVLTGKIQPLIVEKINGVAVLRSPELEMLRILGVGITP
RGARISGDLSNQGQARRGRSLSSALDSLSSLESEPGSGQHKKSPHRGFRSGGYR
NT seq 5025 nt   +upstreamnt  +downstreamnt
atgtcgttggatgaacaccacgagcaaccacggtcttatcagctacagacgtcttatgcc
gccgcttatccgggctcagcccgcccaagctcagcccatcaggactccgcctgtagtggc
tttgcccgcggcggatctgcggaacaagcgtcggtgctgtcgcgttttaaccctcagata
gcaacatggtttgcggaggtttttgcagaacctacacctgtgcaaaaggctgcgtgggaa
aagatttcattgggcggaaacaccctcatcgttgccccgactggatctggtaaaacactc
gccgctttcttgtgggcaatcaatggtttgagcgtagcaagtggtcaaaccgtggctttt
ccagctcctaaaaacaagcctttagctggtaaagagacaaaccaaggcgtcaaggtgctg
tatatatcaccactgaaggcgctgggtgtggacgtagaaaacaatcttcgtgcaccattg
acgggcatcaaccacgtagctgctcgtttaggactggaatattccgacatcagtgtggca
gtccgttccggggataccccggcggcagaacgggctagacaggtgagaaaacctccagac
attttgatcaccacccccgagtccgcgtatctcatgctgacgtctaaagcgggagcgatt
cttaaaaatgttgagaccgtcatcgtggatgagattcatgcggtggctggaacaaaacgg
ggagcccatctttccctaacattagaacgactggaacggctggcaggtcgtactattcaa
cgggtggggttatcggcaacagcgcgcccgatcgacgccgtagcgcactttttagcgggg
gaccgccccgtagacattgtaaatccacgcatagacaagcagtgggagcttagcgttagg
gtgcctgttgcagacatgagcgatgggaccaccacgcggtctgattccaccgccggggaa
gctacgtacaacggcgcacacaacctcggatcagtgctatctgatctacctgatacggag
cttttatcagaatctgcccttcctacgcaggggtcgatatggccgtttattgaggaacgc
gtttatcacgacgtgatgacgcatcgctctacgttaatctttgtgaattctaggaggact
gcggaacggctcactagccgtctcaatgagatttacgcagaagaacacgacccagaatcg
ctctccccgcagctacgcagaacacccgcgcagctgatgaaggctagtgacgtggcagga
ttagctcccacggttattgcgagagcacaccacggttccgtctctaaagatgagcgagca
gagacagaaaggatgctcaaagaggggagtctccgggccgtagtagccaccagttccctt
gaacttggtatcgatatgggtgccgtagaactcgttgttcaggtggagtccccgccttca
gttgcctcagggctacagcgggtggggcgtgccggccacatggtgggtgcgctttctaaa
ggcgtcttttatccgaagcatcgtgctgacttaatccaaactgccgtggttgtggggcgc
atggatgaaggcgcgatcgaggaattgaaggtacccaggaacgcactcgatgtgttattg
cagcaaaccgtagcagcggtatccgtggaagaccttgacgtagaagagtggtatgccact
gttgtgcgcgcgtatccctatcgggatttatcacgatcggtatttgatgcagtcattgat
ttagcaagtggggtgtatccctcgacagattttgctgagctgaggccacgcgtggtgttt
gaccggatcaccggcaggctgactgctcgacctggagcccagcgggtagcagtaacaagc
ggcggaactattcccgatcgcggcatgtttggtgtctttttagcagttcagacgggtaca
ggctcggtccccaggcgagtgggggaactcgacgaggagatggtatatgagtcacgcgta
ggcgacgtgtttacgcttggtgcctctagctggaggatcgaagagattactcgagaccag
gtgctggtgattcccgcgccggggcacacgggaaggcttcctttttggacgggtgatcag
gtcgggcgcctcgcagaattaggtaaagctctaggagagttccgccgtaggactttggcg
cgttgtcaatctttagaagacaacgcgaaggagaatcatggtggtgatctcttagaactg
gaagaactcggtctcgatgcattcgctcgccagaatctcgtgcagtttttacacgaccaa
caggaagctacggggatagtccccgatgaaaaaacattggttttagagcggtttcatgat
gagctcggcgattggagaatagtcttgcacactccttatggcaggggagttaacgctgca
tgggcacttgcagtgggagcaagaatatctgaacgcacgggcatagacgctcaggcggtg
gcctccgatgacggtatcgtattgcgtcttccagaatccgacgaggagccgggagctgat
ctgtttatgatcgacccggatgatattgaggcactagtggccgaacaagtgggaaactcc
gcgctgtttgcttccaggttccgtgaatgcgctgctcgcgctttgttactgccgcgacgt
gaccccggcaagcgcgcccctttatggcaacaacgccagcgcgctgcgcagcttctcgac
gtcgcccgtaaatacccatccttccccataattttggagaccgtccgagaatgcctccag
gacgtgtatgacctgccagctttggtcgagctcttgcaagaaatcaagcaacggcggata
cgaatcgcggaggttgttacatctcaacccagcccattcgctgcctccatactttttagc
tacacgggtgcctttatgtatgagggagacagtcctctcgcagaaaagcgtgctgctgct
ttatccctagaccccgcgctgctcgcaagtcttctagggaccgtggaattacgtgatctt
ttagatccagaaatcatcgcggaagtacatgacaccatgcaacgcaaagcccctcaccgc
agggcgaagaccacagaagaactcgttgacgctcttcgcgttttaggccctgtgccgttg
agcgatctcccggcgattacggaacctccgatgaatcgggagcaggttatggctcagctg
cgcgggcgagtgatggaagtgcggatagcgggagtctcgcatctcgcgcaaacgttggat
gcgccactactgagagacgcgttaggcatacccattcctccgggagttgctgctcaggtg
gagacgatcactgatgccctggagcaactcgtctcacggtgggtgcgggtgcgaggtcct
tttaccctcatggatgtgcagcattcctttggattggctgcggggatcgcccatggggtc
gtcgagaagctatgcgcacaatccaagctcgtagcggggcgttttagacaagatagcgac
gtacaagaatatgtggctactgaggtcttaaaaatcataagggcccgatccctggctgcg
gtgagagagcaaactcagccggtgagtcatgccgcattcgggcgcttcctgcctgaatgg
cagcacgttgcgtcagtaggagagacgcccgagctcgccggtcctgatggagtatttaac
gttgtagagcaactagcaggcgtgcgtttgccggcttctgcgtgggaaacattggtgttg
cctcaacgggtccggaattattcgccgctagaccttgacgagctcacaaataatggcgag
gtgattgttgtcggggcaggacgcgccggcgcgcatgacccgtgggtgatgcttctcccg
accgattacgcggcagagttgattcctcacgtggatatagagacattatccgaaacccag
caaaaaattatggctgtgctttctcgcggtggcggctttctttttagcgatatttaccga
gaaactgtgtcagaacatgaaacttccccggaacaatcgtttgtgccagagcttggttct
gcgttgtgggatctttttgaggcagggctagtcagcccggatgggttcgcgccgattcgt
gcgcggctcgcggcgcattcggggaccaagaccgcacatagaacctcacggcgtcccaac
cgcagcagaatacggatgggacgcacgagttttgcgcatagtcacagattggcacaacca
ccggacgtaataggacgctgggcaacaacagcggcagcagaggacaacgctaccgctagg
tcagtcgcgcatggggaggcgtggttagacagatatggtgtggttacccgaggcgccgtt
gtatcagaggacgttgttggcggttttgccctcgcctacaaggtgctttctggttttgag
gaatccggtaaagccctacgcggctaccttattgaggggttgggggccgctcagttttcc
acatcagcggtaatcgacagacttcgggggctagcagatactcccgatattgctggttgg
ccttctggggcgagttcaccacgcgtatacgtgctggctgctgcggatcccgctaacccc
tatggggcggcgctaccgtggccggaaccagggccaacgcgggcagctggtgctgttgtt
gtgcttatcgacggcctcctcgccgcgcaccttacacgaggcggaagaaacctcacgttg
ttttcaccgcctacgggagttgaacaacaagaattcttaggtatcgttcttggcgcgctt
gcagaatccgtgctaacaggaaagattcagccgttgattgtagaaaaaataaacggagtg
gcggtattgcgttcgcccgaattagagatgttaagaatcttaggcgttgggataacaccc
cgtggggcacggatatcaggagacttgagtaaccaaggccaagcacgtaggggacgcagc
ctttcatccgcattggactcgttgtcttccttagaatcagagcctgggagtggacagcac
aaaaagtctccgcatcgtggttttaggtctggtggataccgctaa

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