Corynebacterium pseudotuberculosis Ft_2193/67: CPTC_01383
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Entry
CPTC_01383 CDS
T03484
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cpsf
Corynebacterium pseudotuberculosis Ft_2193/67
Pathway
cpsf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpsf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPTC_01383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsf03021
]
CPTC_01383
03019 Messenger RNA biogenesis [BR:
cpsf03019
]
CPTC_01383
Transcription machinery [BR:
cpsf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CPTC_01383
Messenger RNA biogenesis [BR:
cpsf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CPTC_01383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIG11671
LinkDB
All DBs
Position
1427481..1429625
Genome browser
AA seq
714 aa
AA seq
DB search
MTTTDNGAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAISGAQGGKAAQSGHSAA
PAAKRNARAQAAPKAEKDSAPVENSVPEVSKEQQEKADQVPAKESKSRRRRVLKTTGTMD
STHETASSEPISQESSPAEEEKPRRRRVTRRVEVSSEKRDPAENSPQDKTDTPSESNDGV
ARVSENGDAEDENRYESRSAARRARRNRARREHREDRQTSQREDNHAEGDRSSNDEEQRK
EASVDNVKATGRREASEQQAADQPQTRETREGSENEHPRQRNGRHHERGERGDRNRRNRR
NRRGRDRDDHRDNSNIEPREDEVLQNIAGILDIVDSNVAFVRTSGYHAGSADVYVNNQMI
RRLGLRAGDAITGQVRMNGDNNHGGHHGHNRGRNRQKYNPLVRVESVNGMSVEEAKARPD
FSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAI
ATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTAVAELAIERAKRLVE
QGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTI
IATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLVPE
EARIMHKLRRILAALDNQQAIDLLIKQLKKTKSNGEFLMQIASSAPMAADAEEE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacaacagataacggcgcacagcgtaatcttgctgcattgcgtctgcccgagctg
cgtaagatcgccgctgaaatgggtctaaaaggcacctctgcattgcgcaaaggtgatctt
atcgccgcgattagcggcgcgcaggggggaaaagctgcacagagcgggcatagtgccgct
cctgcagcaaagcgtaatgctcgagcacaggctgcccccaaagcagagaaagactctgca
cctgtagaaaactcggttccagaagtatctaaggaacaacaagaaaaagctgaccaggtt
ccagctaaggagtccaagtcgcgtcgccgtcgcgttctgaagaccacaggaaccatggat
tcaactcatgaaacagcttccagtgagcctatttcacaggaatcctcgccagcagaggaa
gaaaagccacggcgacgccgtgtgactcgtcgcgtagaagtttcttcggagaagcgcgac
cctgcagagaattctccgcaggataaaacggatacgcccagcgaatcgaatgatggtgta
gcacgagtttccgagaatggcgatgcagaggatgaaaatcgctatgagtcgcgttcggct
gctcgacgtgctcggcgtaatcgtgctcgtcgggaacaccgtgaagaccgtcagacgtct
cagcgcgaggacaatcacgctgagggcgatcgatcttctaacgatgaggaacagcgcaaa
gaagcatccgttgataacgtgaaggcaacggggcgtcgagaagcctctgaacagcaggct
gcagatcagccgcaaactcgggaaactcgtgagggctctgaaaatgagcatcctcgtcag
cgcaatggccgtcaccatgagcgtggcgagcgtggggatcgtaaccgtcgtaaccgccgt
aatcgtcggggtcgtgaccgcgacgatcatcgggataactccaacattgagccccgtgaa
gacgaggttttgcagaacatcgccggcatcctcgacattgtggatagcaatgtcgctttc
gtgcggacctcgggctatcatgcaggctctgcagatgtctacgttaacaaccagatgatt
cgtcgtttgggtttacgtgctggcgatgccatcaccggacaggttcggatgaacggcgat
aacaaccatggcgggcatcatgggcataatcgtggacgcaaccgccaaaagtacaatccg
ttggttcgcgttgaatctgtcaacggcatgtccgtagaagaagctaaggctcgtccggac
ttttctaagctcactccgctgtacccgaaccagcgactgcgtttggaaacagagccgaag
atccttaccactcgtgtgatcgacttgattatgcctatcggcaaaggccagcgtgcgctt
atcgtgtctccgccaaaagctggtaagactacgattttgcaaaacatcgctaatgccatc
gccacgaataatcccgagtgctatttgatggtggtgcttgtcgacgagcgccctgaagaa
gtcaccgacatgcagcgctccgtcaagggtgaggttattgcctctaccttcgaccgtccg
ccaagcgagcacactgctgtagccgagttggcaatcgagcgtgctaaacgactcgtagaa
caaggacaagacgttgtggtgcttctagattccatcactcgccttggccgcgcttataac
aactcttcgcctgcttcaggtcgtatcctgtccggtggcgtggattcgaacgctctctat
cctccaaagcgcttcctgggtgcggctcgtaacatcgaaaatggtggttcgctgaccatc
attgctactgcaatggtagaaactggttctgcaggcgacaccgtgatctttgaggagttt
aagggcaccggcaacgcagagctcaaactggaccgtaagatctccgagcgtcgagtattc
cccgcagtagacgttaacccgtcaggaactcgtaaggacgagctgcttttggttcctgaa
gaagctcgcatcatgcataagttgcgcaggattctcgcagccttggacaaccaacaggcc
atcgacttacttattaagcagcttaagaagaccaaatctaatggtgagttcttgatgcag
atcgcttcaagtgcgccgatggctgcagacgccgaggaggagtaa
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