Corynebacterium pseudotuberculosis Ft_2193/67: CPTC_01487
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Entry
CPTC_01487 CDS
T03484
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cpsf
Corynebacterium pseudotuberculosis Ft_2193/67
Pathway
cpsf03030
DNA replication
cpsf03410
Base excision repair
cpsf03420
Nucleotide excision repair
cpsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPTC_01487
03410 Base excision repair
CPTC_01487
03420 Nucleotide excision repair
CPTC_01487
03440 Homologous recombination
CPTC_01487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpsf03032
]
CPTC_01487
03400 DNA repair and recombination proteins [BR:
cpsf03400
]
CPTC_01487
Enzymes [BR:
cpsf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPTC_01487
DNA replication proteins [BR:
cpsf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CPTC_01487
DNA repair and recombination proteins [BR:
cpsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CPTC_01487
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPTC_01487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
AIG11775
LinkDB
All DBs
Position
1528806..1531442
Genome browser
AA seq
878 aa
AA seq
DB search
MLIDGHSMAFRAFYALPAENFSTSGGQATNAVYGFLSMLSSLLNEEKPSHVAVAFDVGRK
TFRTDMFPDYKAQREATPPEFKGQVGLIKDVLEVLGITTLEKENYEADDVIATLATAAQP
LGFETLIVTGDRDSFQLVNATTTVLYPMRGVSVLHRFTPEAVEEKYGLTPAQYPDFAALR
GDPSDNLPNIPGVGPKTATKWIVEYGSLDELLERADEVKGKAGTSLRERLEQVRMNRTLT
EMIKDLELPYSPDQLGLKPVQVAGVAEKFDELEFGTNLRERVMSAVGADTTTALTEERAE
VTVDQASLKDWLAQHKNQGLALFVRGRGTPATGDAEALAIADKQRHVIAVDLSDIDPQDE
KALAQWLRSETPKYLHEAKATFHMLSGRGFELNGVAHDTAIAAYLLRPGQRTYDLKDVYQ
RHLQRQLSGDETQGQLSLLDAPDSEELIDSVIAILELAQELTKQLEDIDSFELYRDLELP
LVLILARMEAAGIAVDVETLEEQLKVFIERVQEHEAAARNIAGDPSLNLSSPKQLQVVLF
ETLGLPKTKKTKTGYSTAAKEIEALAVKHPDPFLDHLLAHRENQKLKTTLEGLIKAVGSD
GRIHTTFNQTVASTGRLSSTEPNLQNIPVRTQDGRRIRSAFVVGEGYETLLTADYSQIEM
RVMAHLSEDPGLIEAYRQGEDLHNYVGSRVFEVPVDQVTPELRRRVKAMSYGLVYGLSAF
GLGQQLNIPAGEAKQIMTSYFERFGGVKQYLDNVVEQARKDGFTSTLFGRRRYLPELGSD
NRVARENAERAALNAPIQGTAADIIKVAMIRVDQELKKAGVVSRVLLQVHDELVVEIAPN
ELEQVREIVEKEMDAAISLRVPLEVSAGSGPNWEVAAH
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgacggccactcgatggcgttccgtgcgttttatgcgctgccggccgaaaac
ttttccacatcgggtgggcaagcgaccaacgctgtctatggatttttatcgatgctttct
tcccttttgaatgaggagaagccgtctcacgtggcggtggcctttgacgtcggccggaag
acatttcgcacggatatgttccccgattataaggctcagcgtgaagccacacctcccgag
ttcaaaggacaagttgggctcattaaggacgtccttgaggttttgggaattactaccctg
gaaaaagagaactacgaggcagatgatgtaattgctaccctggcaactgcggcgcagcca
ctggggtttgagactctcatcgtgaccggggatcgtgactcattccaacttgtcaatgca
accacgacggttctttatcctatgcgcggggtctcggttttacatcgctttactcctgaa
gccgtggaagaaaaatatggtcttacacctgcgcaatatccggactttgcggcattgcga
ggcgacccttcagataaccttcccaacattccaggtgtggggcctaaaacggcaaccaaa
tggattgtggagtacggcagtcttgatgagctgttggagcgtgctgatgaagtcaaaggc
aaagccggcacgagtttacgcgagcgtttagaacaggttcggatgaaccgaacgctgact
gagatgatcaaagatttagagttgccgtattctccggatcagctgggacttaaacctgtt
caggtagcaggcgtggcggaaaaatttgatgagctggaatttggtaccaacctccgtgaa
cgtgtgatgagcgcagtaggagctgatacaaccacagcactcacggaagaacgtgcggaa
gtaactgtggaccaggcatctcttaaagattggttggcccaacataaaaatcaaggtctt
gcattatttgtacgtgggcgaggtaccccagcgactggagatgctgaagccttagctatc
gcagataaacaacgccatgtaattgcggttgatctttcggatattgacccgcaagatgaa
aaagctctggcgcagtggctgagaagtgagactcccaagtatttgcatgaagcaaaagca
actttccatatgctctctggccgaggatttgagcttaatggggttgcccacgatacggct
attgcggcttatctgcttaggccagggcaacgaacctatgatttgaaagacgtttatcag
cggcatcttcagcgccagctatctggagacgaaactcagggacagctttcgcttctcgac
gcccccgactctgaagagcttattgattctgtcattgcgatccttgagcttgcacaggaa
ctaaccaagcagctggaagatatcgattcttttgagctctatcgtgatcttgaattaccg
ttggtcttgattcttgcgcgtatggaagccgcaggtatcgcggttgacgtggaaacccta
gaagaacagttaaaagtttttattgagagagtccaagagcatgaagcggctgcccgaaat
attgcgggtgatccatccttaaatctttctagccctaaacaactccaagttgttcttttt
gaaaccctggggttgcctaaaaccaagaagacaaaaacggggtattccacagcagctaaa
gagattgaagcattggctgtgaaacacccagatcctttcctcgaccatctgctcgcgcac
cgcgagaatcagaaactgaaaacaactcttgaaggtttgattaaggcagtcgggtcggat
ggccgtatccataccacttttaatcagactgttgcgtctactgggcgtctaagttcaaca
gaacctaatctccaaaacattccagttcgcacacaagacggcagaagaattagatcggca
ttcgttgtaggcgaaggctatgaaacgctgctcaccgcagattactctcagattgagatg
cgcgtcatggcgcatctttcggaggacccgggtcttatcgaggcttaccgtcagggggaa
gatctccataactacgttggatccagagtctttgaggttccggtggatcaggtaacacca
gagctacgtcgacgagtaaaagcgatgagttatggcctggtctatggcctctcagccttt
ggcctggggcaacagttgaatattcctgccggtgaggctaaacagattatgacgagctac
ttcgagcgttttggtggggtgaaacagtatctggataatgtggtggaacaagcacggaaa
gatggttttacctctacattatttggcagacgccgataccttccagagctcggctcagat
aatcgtgtggctcgtgaaaatgcagaacgtgctgcgcttaatgcccctatccagggaacg
gcggcggatattattaaggtcgcaatgattcgtgttgaccaagagttgaaaaaagctggg
gttgtctctcgtgtgttgctgcaagttcacgatgaactggtggtggaaatcgcaccaaac
gagcttgagcaagtgcgtgagatagtagaaaaggaaatggatgcagccatttccttacgc
gtaccacttgaagtctcagcaggtagtggtcccaactgggaagtcgccgcgcactag
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