Chlamydia psittaci GR9: B598_1057
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Entry
B598_1057 CDS
T02309
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cpsg
Chlamydia psittaci GR9
Pathway
cpsg02020
Two-component system
cpsg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cpsg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B598_1057 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B598_1057 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsg03021
]
B598_1057 (rpoN)
Transcription machinery [BR:
cpsg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B598_1057 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
23S_rRNA_IVP
Motif
Other DBs
NCBI-ProteinID:
AFS21121
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All DBs
Position
1118952..1120223
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AA seq
423 aa
AA seq
DB search
MFQHHQKLSLNYLPSLRMQQGLQMLQSPITELSSYILQQIIHNPFFDISSLEEEEWSTCS
SFPSVDASYSRPESLFSHLLTQVQQTFDRPEDLLIAQHIIGNLSDQGLFLSSPEELSLQL
EVSLEAVNKVWKTIQYFHPLGIASPSLQDYWLLHLEGSPHTLAYKIIKEHYSLLINCDFL
RIAKKCHCSPADLRHALKNALTTIPWCPAKGYASSSNIQPALPDVYVAKKDRVWEIQISS
KGLPPIKLNSEVFHIYEQLPREEKKTLTQQILSAKWLIKNLRKREQTLFSIVEKILPHQE
NFLLGKTSCPKPLSVKNLSEELPYHESTIFRAIENKTLAGPIGIIPLKHLFPRPVSTSDS
QSKETILQWIHQWVTSETTPLSDADISKRISQQGIQCARRTVAKYRTQLKILPAHKRKVH
SQM
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagcaccatcaaaagctttctcttaactaccttccctcgctgcgtatgcagcag
ggattgcaaatgttacaatctccgattacagaactctcctcctatatacttcaacaaatc
attcataacccatttttcgatatctcttctctagaagaggaagaatggtccacatgttct
tcattcccttccgtggatgcttcctattctcgtcctgaatctttattttcccatcttctc
acacaggtgcaacaaacttttgatcgtcctgaagatctgcttattgctcaacacattata
ggaaatctctcagatcaaggtttgtttctttcttctcctgaagaactctcgctacaactt
gaagtgtctctagaggccgtgaataaagtatggaaaacgattcaatatttccatcctcta
ggtattgcttctccatctctacaagattattggcttctccatttagaaggctccccacac
acccttgcttacaagattatcaaagagcactactctcttttgattaactgtgacttcctc
cgtatagcaaagaaatgtcactgctcccctgcagacttaagacatgctcttaaaaatgca
ttaaccacaatcccgtggtgccctgccaaaggatatgcgtcctcctccaatatacaaccc
gcgcttcctgacgtctatgtcgctaaaaaagatcgggtttgggagattcaaatcagttcc
aaaggactacctcctataaaactgaatagcgaagtatttcacatttatgaacagttacct
agagaggaaaaaaagaccctcacacagcaaattctttctgctaaatggctgattaaaaac
ttaagaaaacgagaacaaacattgttttcgattgttgagaaaatccttcctcatcaagaa
aactttctcttgggcaaaacatcctgccctaagccgttgtctgtaaaaaatctatcggaa
gaattgccctatcatgaatctacgatatttcgtgctatagaaaataaaaccttggcaggc
cctataggtatcatacctctgaaacacctcttccctcgtcctgtaagtactagtgattct
caatccaaagaaactatattacaatggattcatcaatgggtaacctctgaaacaacacct
ttgtctgacgctgatattagcaaacgtatctcacaacagggcatccaatgtgcccgtcgt
acggtagctaaataccgaacacaattaaaaattctccctgcgcataaaagaaaagtacat
tcacaaatgtaa
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