Corynebacterium pseudokroppenstedtii: Q0N40_04150
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Entry
Q0N40_04150 CDS
T10643
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpsk Corynebacterium pseudokroppenstedtii
Pathway
cpsk03030
DNA replication
cpsk03430
Mismatch repair
cpsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q0N40_04150 (dnaE)
03430 Mismatch repair
Q0N40_04150 (dnaE)
03440 Homologous recombination
Q0N40_04150 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpsk03032
]
Q0N40_04150 (dnaE)
03400 DNA repair and recombination proteins [BR:
cpsk03400
]
Q0N40_04150 (dnaE)
Enzymes [BR:
cpsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q0N40_04150 (dnaE)
DNA replication proteins [BR:
cpsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q0N40_04150 (dnaE)
DNA repair and recombination proteins [BR:
cpsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q0N40_04150 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WPF25733
UniProt:
A0AAU0Q251
LinkDB
All DBs
Position
962144..965722
Genome browser
AA seq
1192 aa
AA seq
DB search
MANSSFVHLHNHTEYSMLDGMAKVDLLVDEVKRQNMPAVGMTDHGNMFGSDAFYRAMTAN
DIKPIIGVECYMAPDSRFNKKRVRWGEAHQKRDDVSASGAYLHQTMIAENATGLKNLFYL
SSMASYEGQLGKWPRMDAELIAEHSEGIIATTACPSGEVQTRLRLGQFDEALKAAAKWQD
IYGKDNYFLELMDHGIEIEQRVRNELLEIGRKLNIPPLVTNDCHYVTKDQARSHEVMLCV
QTGSTMNEPTLDQGGNRFAFNGDGYYLKSAREMRDTWDDMVPGGCDNTLLIAERVGDYSE
IWEPHTHDRMPKYDVPEGYTPTSWLTHEVEQGLKKRFEGQPVPQEYTDRAKYEIGVIDFK
GYPSYFLVVADLIKHARRVGIRVGPGRGSAAGSLVAYALTITNIDPLQHGLLFERFLNPE
RPSAPDIDIDFDDRRRGEMIRYAADNWGEDKVAQVITFGTVKTKQALKDSARAHFGQPGF
QMAERITKALPAPIMAKDIPLSGIVDPEHPRYSEAAEVRQLIETDPDVKKIFDTARGLEG
VVRQAGVHACAVIMASVPLLDHIPMWKRAQDGAIITGWPYPACEAIGLLKMDFLGLRNLT
VIGDCIENIKENRGEDLDLEGLSVVDEPTYELLSRGDTLGVFQLDSGGMRELLKRMGPTE
FSDIVAALALYRPGPMGEGAHWSYADRKNGREKITPIHPELEEPLRDILAETYGLIVYQE
QIMKISQKVANYSAGQADSFRKAMGKKKPEVLAKERVSFEAGMKENGYSDDAINTLWKVI
LPFAGYAFNKSHAAGYGLVSFWTAYLKANYTAEYMAALLTSVSDKKDKSAIYLSDCRHLG
IDVLSPDVNSSKYTFQSVGKDIRFGLGAVRNVGEDVVESIVSTRREKGAFKDFTDYLNKI
DTIACNRRVTESLIKAGAFDSMGHPRKGLYLIHEDAVDSVISTKKAADKGQFDLFAGLGG
EAEEEDSAFSIEVPDQEWDRKHKLALEREMLGLYVSGHPLDGYEETLAAQTDTPLTTVLS
GELKDKQDVVIGGIISAVDRRFSKKDGSPWAIVTIEDHNGASVDILVFNKLYALVAPLIV
EDTIIKAKAHIKYRDDRMSVFCDDLTQADLSLNGGGKGSPLKLKMRTDQCTKENIARLKK
VLVENKGDSDVYLTLVDGANSTMMVLGNHLRVDRSSSLMGDLKATLGAGIVA
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcttcctttgttcacctgcataaccacactgagtattcaatgctcgacgga
atggccaaggttgacctgctggtggacgaagtaaaacggcagaacatgccggcagtcgga
atgaccgaccacggcaacatgttcggatccgacgctttctaccgcgccatgacggcgaac
gacatcaagcccattatcggcgtcgaatgctatatggcccccgactcccgctttaataaa
aagcgcgttcggtggggtgaagcccaccagaagcgtgacgacgtgtcggcctcgggtgct
tacctgcaccaaacgatgatcgcggagaatgccaccggactgaaaaacctcttttacctg
tcctcgatggcgtcgtatgaggggcagcttggtaaatggcctcgcatggatgctgagctg
atcgcagagcattccgagggaatcatcgctacgacggcgtgcccgtctggtgaagttcaa
acccgcctccggctcgggcagttcgacgaagcgctcaaagcggccgccaaatggcaggac
atttacgggaaagacaattatttcctggagctcatggaccacggtatcgagatcgagcag
cgggtccgtaatgagttattagaaattggccgaaagctcaacatccctccgctggtgacg
aacgattgccactacgtcaccaaggaccaggcccggtcacacgaagtgatgctgtgtgtg
caaacgggttcgacgatgaacgaacccaccttggaccaaggcggtaaccgctttgccttt
aacggtgacggctactacctgaaatcggcccgggagatgcgagatacgtgggacgacatg
gtccccggtgggtgcgataacaccctgcttatcgccgagcgcgtcggggattacagcgaa
atttgggagccccacacccacgatcgcatgccgaaatacgacgtcccagagggctacacg
ccgacgtcgtggctcacccacgaagttgaacaaggcctgaaaaagcgcttcgagggccag
cccgttccgcaggagtacaccgatcgggccaagtacgaaatcggtgtcatcgatttcaag
ggctaccccagctacttcctcgtcgtggccgatctgatcaagcacgcgcgccgggtcggt
attcgcgtggggcccggccgtggttcagctgcaggatccttggttgcgtacgcgttgact
attacgaatatcgatccgctccagcacggattgttgttcgagcgattccttaaccctgag
cgcccgtcggcacctgatatcgatatcgacttcgacgatcgtcgccgcggtgagatgatc
cgctatgcggcagataactggggtgaagacaaggtcgctcaggttattaccttcggcacg
gtgaagacgaagcaagcgttgaaagactctgctcgcgcgcacttcgggcaaccgggtttc
caaatggcggagcggattacgaaggccctgccggcgcccatcatggcgaaggacattcct
ttgtccggcatcgtcgaccctgagcacccccgctacagcgaggccgctgaggttcgccag
ctcatcgaaaccgatcccgatgtgaagaagattttcgacacggctcggggtctcgagggc
gtcgtccgtcaggctggtgttcacgcctgtgccgtgattatggcgtcggtgccattgctc
gaccacatccccatgtggaagcgcgcccaagacggggcgatcatcaccggctggccatac
ccggcgtgtgaggccattggcctgttgaagatggacttcctggggctgcgaaacctcacc
gttatcggcgactgcattgagaacatcaaagaaaacagaggagaggacctcgaccttgag
ggcctctctgttgtcgacgagccgacgtatgagttgctctcgcgcggcgatactctcggc
gtgttccagctggatagtggtggtatgcgtgagctgctcaaacgcatgggcccaaccgaa
ttctcggatattgttgcggcgttggcgctctaccgcccaggaccgatgggtgagggtgcg
cattggtcctacgccgaccgtaagaacgggcgtgaaaagatcaccccgattcaccctgaa
ttggaggaaccgcttcgagacattctggcggagacctacggcctgattgtctaccaggag
cagatcatgaagatctcgcagaaggtagccaattattccgcgggccaagctgatagcttc
cgaaaagcgatgggtaagaagaagcccgaggttctggcgaaagaacgtgtcagtttcgaa
gccggaatgaaagagaacggctattcggacgacgctattaataccctgtggaaagtgatt
ctgccgttcgccggttacgcctttaacaagtctcacgccgccggttacggattagtgtcc
ttctggacggcatatttgaaggcgaattacacagccgagtacatggcggctcttttgaca
tccgtgtcagataaaaaagataagtctgccatttatctttcggattgccgtcacttgggt
attgatgtgttgtctcccgacgttaattcgtcgaaatacacgttccagtcagtgggcaag
gatattcgctttggtctgggcgctgtccgcaatgttggtgaagatgtcgtggagtcgatt
gtttcgacgcgccgggagaaaggtgcgtttaaagacttcactgactatttgaataagatc
gacactattgcgtgtaaccgacgagtgaccgaatcgttaatcaaagccggtgcattcgat
tccatggggcacccgcgtaaagggctttatttgatccatgaagacgcggtcgattccgtc
atttcgaccaagaaagcggcggacaaggggcagttcgatcttttcgctggtctaggtgga
gaagctgaggaagaagattcggccttttccattgaggttcctgaccaggaatgggaccgt
aagcataagttggctttagagcgcgaaatgctcgggttgtatgtctcaggacatccgctt
gacgggtatgaagagacattagctgctcagacggatacgccactgaccaccgtgttgtcg
ggtgagctgaaggataaacaggacgtcgttattggcggaattatctccgccgtggaccgt
cgtttctcgaagaaagatggctccccatgggccattgtcactattgaggaccataacggc
gcttccgtggatatcctcgttttcaataaactctatgcattagtggcaccactcattgtg
gaagacacgattattaaagctaaggcgcatattaaataccgtgatgaccgcatgagtgtc
ttttgcgacgacctcacccaagcggatttgagcctcaacggtggtggcaaagggagtccg
ctgaaattgaagatgcgcactgaccaatgcaccaaggagaatattgcccggctaaagaaa
gttttagtcgagaataagggcgactccgatgtttatttgacccttgtcgacggcgccaac
tccaccatgatggttctgggcaatcacctgcgggtggaccgttcgagttccctgatgggt
gaccttaaagccacgttgggcgctggtatcgtggcctag
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