Corynebacterium pseudokroppenstedtii: Q0N40_04850
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Entry
Q0N40_04850 CDS
T10643
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cpsk Corynebacterium pseudokroppenstedtii
Brite
KEGG Orthology (KO) [BR:
cpsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpsk03019
]
Q0N40_04850
Enzymes [BR:
cpsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Q0N40_04850
Messenger RNA biogenesis [BR:
cpsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Q0N40_04850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
nSTAND_NTPase5
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WPF25856
UniProt:
A0AAU0Q3S1
LinkDB
All DBs
Position
complement(1133230..1136097)
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AA seq
955 aa
AA seq
DB search
MTEASAEDLPIFHRFAHQHDFPFDRFQIDGCHAIERGRGVLVSAPTGSGKTIVGEFAVFL
ALETGKRCFYTTPIKALSNQKYNDLRATYGDDRVGLMTGDVSINREADVIVMTTEVLRNM
IYADADSLDNLSHVVMDEVHYLADPERGPVWEEIILNLDESVSIVALSATVSNIEQFGEW
IKMTRGDTDIIVWEHRPVPLHQYMLLGNSIIPLFSRDNDDATQELSAPINPELVSRCAAA
ERRSNGRRKRPHRPAVIGQLQAASMLPAIIFIFSRAGCEGALAQCYTARVQLTTRDEARE
ILSIIDADTADIPQEDLDLMGFRRWRTNLSRGIAAHHAGMLPAFRHIVEKLFVRGLLKVV
FATETLALGINMPARTVVLESLVKFNGEAHVDLTPAQYTQLTGRAGRRGIDVLGNAVVLW
QPSMDPEAVAGLASTRTYPLISTFRPGYNMSVNLLNTLGVEKSHRLLERSFAQFLANEDV
VARAHERRAHQRHADSQHDELLGLLGHRSENKLAEYVAIRKNLSHEEKKAQAENRKERFK
EISRCLRSLTVGDVIALPEGRNPALAVCVRAAGAGKASSKEKHRHDSARRYRGRRRHHDR
ENPDMDGQDPRPMVITEDGRVGQLHADELGNVPMTVGRMRLPRDVSRHPKRARSLVRSEF
RRQSFHRPRSLKPKARVRKNATIKSLRKELRAHPVHKWENREELVRAYARLAHTREKIAD
HSDTQSGSGASGRVLDADTLVSTFDRMIALLREMDYVDPPIDDESDAVASSDAAQEGSNG
TPDLSLTEEGLRLARIHNQSDLLIAQCLRRKIWDDLDPAELAGVVSTCVFENRKSVPGDV
EVPTEPLATAIENTERLWEEIVTDEERHHLPMTRPIETELATAMHQWTAGAPLAYCVQAA
AANGTSLTPGDFVRSCRQVIDVLNQIKTAGYSNDIRAHARQAVETMRRGVVAMGS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaagcgtcagccgaggaccttcctattttccaccgctttgcccaccagcacgat
ttcccgttcgaccgattccaaattgacggatgccacgccatcgaacgcggccgcggagta
ctcgtcagcgcaccaacaggctccggaaaaacaatcgtcggggaatttgccgtatttctc
gcactagaaacaggcaaacgctgcttctacaccacgcctatcaaggcactgtcgaaccag
aaatacaacgatctccgcgccacctacggtgatgaccgagtgggcctcatgaccggggac
gtctccatcaatcgggaagccgacgtcatcgttatgaccactgaggtcctgcgcaacatg
atctacgccgacgcggactccctggacaacctctcccacgtggtgatggatgaggttcac
taccttgccgaccccgaacgcggcccagtatgggaagaaatcatcctcaaccttgacgag
tcggtatccatcgtcgctctctccgccacggtgtccaatatcgaacaattcggtgagtgg
ataaagatgacccgcggcgacaccgacatcatcgtctgggaacaccgccccgtcccactt
caccaatacatgctgctaggaaactcaattatcccgctattttcgcgagacaatgacgac
gctacgcaggaactatcagccccgatcaacccagaactagtctcacgatgcgcggccgcg
gaacgacggagtaacggccgacgtaaacgcccacaccgcccagccgtaatcgggcagctg
caggcagcatccatgctccccgcgatcatcttcatcttctcccgagcaggctgcgaagga
gcgctagcccagtgctacacagcgcgagtacaactcaccacgcgcgacgaagcacgcgaa
attctctccattatcgacgccgacaccgctgacatccctcaagaagacttggacctcatg
gggttccgccggtggcggaccaacctctcgcggggaattgcggcacaccacgcaggaatg
ctgcccgccttcaggcacatcgtcgaaaaactattcgtgcgtggcctgctcaaagtcgtc
ttcgccacagaaacactggcgctcgggatcaacatgcctgcccgcaccgtcgtcctcgaa
tcactcgtcaaattcaacggcgaagcccacgttgatctcacccctgcccaatacacccag
ctcaccggccgcgccgggcgtcgcggtatcgatgtgttgggaaacgcggtggtgttatgg
cagccgtcgatggatccagaagctgtcgccgggttggcgtcgacacgaacctatccgctg
atttcgacgttccgccccggctacaacatgtccgtcaatctgctcaatacgctgggggtt
gagaaatcacaccgccttttggagcgatcattcgctcagttcttagcaaatgaggacgtg
gttgctcgtgctcatgagcgacgcgctcatcaacgtcacgcagattctcagcatgatgag
ctcctgggcctcctcggacacaggtctgaaaacaaactggcagaatacgtcgctattcgc
aaaaacctctcccatgaagagaagaaagcccaggctgagaaccggaaagaacggtttaaa
gaaatctctcgttgcctccgttcgctcaccgtaggtgatgtgatcgcacttccggagggg
cgcaaccccgcattggcggtgtgcgtcagagccgctggagcgggtaaggcatcatctaaa
gagaagcaccgtcacgattcggcgcgacgctaccgcggccgccgtcgacaccatgaccgt
gaaaacccagacatggacggtcaggatccacggccgatggtgatcacggaagatgggcga
gtggggcagcttcatgcagatgagctgggcaatgtgcccatgacggttgggcggatgcgt
cttcctcgagatgtgtctcgccatcccaagcgggcacgctcacttgtccgctctgagttc
cgtcgacaatcttttcatcggcctcgatctctcaagcccaaagcccgtgtgagaaagaac
gccacgatcaagtcgttgaggaaagagctgcgtgcccacccagtacacaagtgggagaac
cgggaggaactcgtccgtgcctatgcccgattggcacacacgcgggagaaaatagcagat
cattcggacacacagtcgggttcgggcgcgtctggaagagtgctcgatgcggataccctg
gtctctaccttcgataggatgatcgcgctgctgcgtgagatggactatgtggatccgccc
atcgatgacgaatccgatgctgtggcctccagcgacgctgcccaggaaggctccaatggc
acccctgacttgtcgttgaccgaagaaggcctgcgtctggcacgtattcacaatcagtcc
gatctgctcattgctcagtgtttgcgacggaagatttgggatgatttggaccccgctgag
ctagcaggggtggtgagcacctgcgtcttcgagaatcgtaagtcggttccgggagacgtt
gaggtcccgacggagccattagccacggcgatagagaacactgagcgtctctgggaggag
atcgtgacagatgaagagcgtcatcatctcccgatgaccaggcctatcgagaccgagctg
gccacggcgatgcatcagtggacggccggcgcacctttggcgtattgcgttcaagccgcc
gccgcgaacgggacatcactaacaccaggtgatttcgtccgatcgtgtcgacaagtcatc
gacgtgcttaatcaaattaaaacagcaggatattccaacgatattcgcgcacatgctcgg
caagcggtggagaccatgcgtcgaggcgtcgttgccatggggagttaa
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