Corynebacterium pseudokroppenstedtii: Q0N40_09545
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Entry
Q0N40_09545 CDS
T10643
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cpsk Corynebacterium pseudokroppenstedtii
Pathway
cpsk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpsk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q0N40_09545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsk03021
]
Q0N40_09545
03400 DNA repair and recombination proteins [BR:
cpsk03400
]
Q0N40_09545
Enzymes [BR:
cpsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q0N40_09545
Transcription machinery [BR:
cpsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q0N40_09545
DNA repair and recombination proteins [BR:
cpsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q0N40_09545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3659
Motif
Other DBs
NCBI-ProteinID:
WPF24759
UniProt:
A0AAU0PXI7
LinkDB
All DBs
Position
complement(2218577..2222575)
Genome browser
AA seq
1332 aa
AA seq
DB search
MLDVNLFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITSVDEEARHTDQETLEADMFMEKKEVEADRDEELAERQQKLEED
LKELESNGAKADAKRKVQNAAEREMRHIRERAEREIDRLDEIWNTFIKLAPKQMIVDETI
YSELVDRYEDYFTGGMGAEAIQTLIKNFDLEAEAEKLSEVIRDGKGQKQVRALKRLRVVA
AFLRSGNDPAAMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKLMALELFKPFVMKRLVEKSYAQNIRSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYFLTLEKSEDQLGGE
GAYHEADENGPKRGTYSSFAEALMARDRGVLGLQAPIEVRISHLRPPEDIEAELFPDGWQ
RGQKWTAHTTLGRIMFNELLPWNYPFVNGVMAKKAQAVIINDLAARYPMITVAQTVDKMK
DAGFYWATRSCVTISMDDVLVLPNKEEILQRYEKQAATIEKKLARGKINNEERYRSLVDL
WKECTDFVGESVEKIYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSRGDYITRPIK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTLKGL
EVDVAKPVLDAEGNETGEFTRADFLETALTGRYLAKDAVNDKGDVIYERGAFVGDAEAKK
MVAEGVRTATVRTVMMCETATGVCATCYGRSMATGQKVDIGEAVGIVAAQSIGEPGTQLT
MRTFHQGGVGGDITGGLPRVQELFEARVPKNQAPIASTEGTIELEDDGNFYTLTITPDNG
EDEVVYEKLSKRQGLAVTQEPGGFEHQLRTGDHVVTGQPLLRGAPDPHEVLRVEGVTGVQ
KHLIEQVQKVYRDQGVAIHDKHIEIIVRQMLRRLTVVDSGSTELLPGSLIDRNEARAINK
AVATNGGEGAAFRQEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKEN
VIIGKLIPAGTGISRYRNISVEPTEEARAQAFSMNTSYGDGFYGEDGAYGEFTGAAVRLD
DQGFDGGFGDIS
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaatcttttcgacgagctccgcatcggtctcgccacggccgatgacatc
cgtcgctggtcacacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaaa
cccgagaaggacggcctgttctgcgaacgcatcttcgggccaacccgcgactgggaatgt
gcctgcggtaaatacaagcgagtccgctacaagggcatcgtctgtgaacgctgtggcgtg
gaagtgaccaagtccaaggtccgccgtgagcgcatgggccacatcgagctggccgcgccc
gtcacccacatctggtacttcaagggcgtgccctcacgcctggggtacctgctggacctc
gcaccgaaagatctggaaaagatcatctacttcgccgcgaacatcatcacctcggtggac
gaggaggcccgtcacacggaccaagaaaccctcgaagccgacatgttcatggagaagaaa
gaggtcgaggctgaccgcgacgaagaactagcggagcgccagcagaagctggaagaagac
ctcaaagagctcgaatccaacggtgcgaaagccgatgccaagcgcaaggttcagaacgcc
gctgagcgcgaaatgcgccacatccgtgagcgtgccgagcgtgagatcgaccggctcgac
gagatctggaacacgttcatcaagcttgctcccaagcagatgatcgtcgacgaaaccatc
tactccgagcttgttgaccgctacgaggactacttcaccggcggcatgggtgcagaagcc
atccagacgctgattaagaacttcgacctcgaagctgaagcggagaaactcagcgaggtt
atccgcgacggcaagggacaaaagcaggtccgcgcgctcaagcgtctgcgtgttgtcgcc
gccttcctgcgctccggtaacgatccggcagcgatggtcctggacgccatcccggtgatc
ccgcccgagcttcgcccgatggttcagctcgatggtggccgcttcgcgacgtcggacctc
aacgacctgtaccgtcgcgtcatcaaccgcaacaaccgtctgaagcgcatgatcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgcttcaggaatccgtcgacgcg
ctcttcgacaacggacgtcgcggacgccccgtcacgggccccggcaaccgtccgctgaag
tcgctctctgatttgctgaaaggtaagcagggtcgcttccgtcagaacctgctgggtaag
cgtgtcgactactccggccgttcggtgattatcgtcggcccgcagttgaaactgcaccag
tgcggtctgccgaagctcatggcgttggagctgttcaagccattcgtcatgaagcgcctg
gtggagaagtcctacgcgcagaacattcgctccgcgaagcggatggtggagcggcagcgt
cccgaagtgtgggacgtcctcgaagaagccatcgcggaacaccccgtcatgcttaaccgt
gcgccgacgctgcaccgcctgggtattcaggcgttcgagccggtcctcgtcgagggtaaa
gctatccagctgcaccccttggcatgtgaggcgttcaacgccgacttcgacggtgaccag
atggctgtccacctgccgctgtctgcggaggcccaggctgaggcccgcgtgctgatgctc
gcctccaacaacatcctgtccccggcatccggtaaaccactggccatgccgcgtctggac
atggtgaccggcttgtacttcctcaccctggaaaagagcgaggatcagctcggtggcgaa
ggcgcctaccacgaagccgacgagaacggcccgaagcgtggcacatactcgtccttcgcc
gaggccctcatggcgcgcgaccgcggagtgcttggcctccaggcgcccatcgaggttcgc
atcagccacctccgcccgccggaggatatcgaggcagaactgttccccgacggatggcag
cgcggccaaaagtggaccgcccacaccaccctaggtcgcatcatgttcaacgaactgctg
ccgtggaactacccgttcgtcaacggtgtcatggcgaagaaggcgcaggccgtcatcatc
aacgacctcgccgcacggtaccccatgatcaccgtcgcgcagaccgtcgacaagatgaag
gacgccggtttctactgggcaacccggtcctgtgtcaccatctccatggacgacgtgctc
gttcttcccaacaaggaagaaatcctgcagcggtacgagaagcaggctgcgaccatcgag
aagaagctcgcccgaggcaagatcaacaacgaagagcgctaccgctccctcgttgacctg
tggaaggaatgcaccgacttcgttggtgaatccgtcgagaagatctaccccgacgacaac
ccaatcccgatgatcgtgaagtccggtgctgccggtaacatgcgccagatctggacgcta
gccggcatgaagggcatggtcacgaactcgcgtggtgactacatcacccgcccgattaag
acctccttccgcgagggcttgtcggtcttggagtacttcaacaactcgcacggttcgcgt
aagggcctggccgacaccgctctgcgtaccgccgactccggttacctcacgcgtcgtctt
gtcgacgtcgctcaggacgttatcgttcgcgaagacgactgtgggactcttaagggtctg
gaggtcgacgtcgcgaagccggtactggacgccgagggcaacgaaacgggagaattcacc
cgcgctgacttcttggagaccgcgctgaccggccgttacctggccaaggatgctgtcaac
gacaagggcgacgttatctacgagcgtggcgctttcgtcggcgatgccgaagccaagaag
atggttgccgagggcgtgcggaccgctactgtccggaccgtcatgatgtgtgaaaccgcc
accggtgtgtgcgcgacctgctacggacgctccatggccaccggccaaaaggtggacatc
ggagaagccgtcggtatcgttgccgcgcagtccattggtgagcctggtacgcagctgacc
atgcgtacgttccaccaaggtggtgtcggtggcgatattaccggtggtctgcctcgtgtg
caggagctcttcgaagctcgtgtgcccaagaaccaggcgccgattgcgtccactgaggga
acgatcgagctcgaggacgacggcaacttctacacgctgaccatcacgcctgacaacggc
gaggacgaggtcgtgtacgagaagctgtcgaagcgccagggtctggcagtgacgcaggaa
cccggcggattcgaacaccagctgcgtaccggcgaccatgttgtcacaggccagccactg
ctgcgcggtgctcccgatccgcacgaagtgcttcgcgttgaaggcgtgacgggtgtgcag
aagcacctcattgaacaggtccagaaggtctaccgtgaccagggcgtggcgatccatgac
aagcacatcgagatcattgtccggcagatgctgcgacgcctgactgtcgtcgattcggga
tccaccgaattgctgccgggtagcctgattgatcggaacgaagcgcgagctattaacaag
gccgtcgcgacgaatggtggcgagggtgccgccttccgtcaggagatcatgggtattacc
aaggcgtcgttggccacggaatcctggttgtccgcggcgtcgttccaggagaccactcgt
gtcctgaccgatgcggcgatcaacaagcggtccgataagctcatcggtctgaaggagaac
gtgatcatcggtaagctcattccggctggtacgggcatctcccgctaccggaacatctcg
gttgagccgaccgaggaggcccgtgcgcaggcgttctccatgaacaccagctacggcgat
ggcttctatggcgaagacggtgcgtacggcgaattcaccggcgcggctgttcgcctggat
gaccaggggtttgatggaggcttcggcgacattagctag
DBGET
integrated database retrieval system
