Corynebacterium pseudogenitalium: KBP54_01840
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Entry
KBP54_01840 CDS
T08714
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cpsl
Corynebacterium pseudogenitalium
Pathway
cpsl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KBP54_01840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsl03021
]
KBP54_01840
03400 DNA repair and recombination proteins [BR:
cpsl03400
]
KBP54_01840
Enzymes [BR:
cpsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KBP54_01840
Transcription machinery [BR:
cpsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KBP54_01840
DNA repair and recombination proteins [BR:
cpsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KBP54_01840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
UUA87617
LinkDB
All DBs
Position
403340..407338
Genome browser
AA seq
1332 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDMSTLEAEMLLEKKEVEQDANAEIAERAQKLEED
LAELEAAGATAAARKKVQNAADKEMQHIREVGEREVERLDEIWSTFQKLAPKQMIIDEFL
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLEAEAEELRTIIAEGKGQKKVRALKRLKVVA
AFQRSGNDPAGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKMHECGLPKLMALELFKPFVMKRLVDNEYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMEKGEDEIGGE
GRFTPADENGPAKGVYSSYREAIMAYDLGVLGLQAPIKVRIDHLRPTIEIEAEQFPDGWS
KGQAWMMETTLGRIMFNELLPFNFPYQEGAMVRKGGGAGKVLLGDIIQSMVEKYPMITVA
QTLDKLKDAGFYWATRSGVTISMSDVLVLPNKTEILEQYEQRAEEIERKYWEKGALTEEN
RYDRLVELWQDATNQVGEAVEALYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLTVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREH
DCGTRQGVKVPVAQLAGEKFVRDEFVETSVAGRVLASDAKDAEGNVVLEADAELSEERID
ALVAAGVEEVKVRSVLTCQTPTGVCAKCYGKSMASGKLVDIGEAVGIVAAQSIGEPGTQL
TMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVAGTVTLEDEGNFWTLTIHPDD
GSDVVVYEKLSKRQGLAQVRRPMESNPNAMIERSLREGDHVNVGDRLLRGAADPHDVLEV
LGRRGVEKHLIDEVQAVYRTQGVSIHDKHIEIIIRQMLRRGTVIDSGTTEFLPGTLVDLS
EARQVNAAAVADGGEPAEMRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDQ
LIGLKENVIIGKLIPAGTGISRYRNITVKPTEAARSAAYSIPSFGDGIYGDEAYGDYTGA
SVPLEEYGYDQI
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaacctcttcgacgagcttcgcatcggcctggctactgctgacgacatc
cgtcgttggtcgcatggtgaggtcaagaagcccgaaacgattaactaccgcacgttgaag
ccggaaaaggacggcctgttctgcgagcgcatcttcggtcctacccgtgactgggagtgt
gcgtgtggcaagtacaagcgtgtccgctacaagggcatcatttgtgaacgttgtggcgtc
gaggtcactaagtcgaaggttcgccgtgagcgcatgggccacattgagctggccgcgccg
gtgacccacatttggtacttcaagggcgtcccatcgcgcctgggttacctgctggatctt
gctccgaaggacctggagcgcatcatttacttcgccgcgaacatcatcaccagtgttgat
gaggaggcgcgtcacaacgacatgtcgacgctcgaggcggagatgctgctcgagaagaag
gaagtcgagcaggacgcgaatgccgagattgcggagcgtgcgcagaagctggaggaggac
ctcgctgagctcgaggctgccggtgcgactgctgccgcccgcaagaaggtgcagaacgct
gctgacaaggagatgcagcacatccgcgaggtcggcgagcgcgaggtcgagcgcctcgac
gaaatttggtccaccttccagaagcttgctccgaagcagatgattatcgacgagttcctc
tacgaagagctcgtggaccgctacgaggactacttcaccggcggcatgggcgctgaggcg
atccagacgctgatccgcaacttcgacctcgaagctgaggcggaggaactgcgcaccatc
atcgctgagggcaagggccagaagaaggtccgcgcactgaagcgcctgaaggttgtggct
gcgttccagcgttccggcaatgatcctgccggcatgatcctggacgcgatcccggtgatc
ccaccagagctgcgtccaatggtgcagctcgacggtggccgtttcgccacctcggacctg
aatgacctgtaccgtcgcgtaattaaccgcaacaaccgtttgaagcgcatgattgacctg
ggagccccagagatcatcgtgaacaacgagaagcgcatgctgcaagagtctgtcgacgcc
ctcttcgacaacggccgtcgtggccgccctgtcacgggcccaggcaaccgtccgctgaag
tccctgtctgacctgctgaagggtaagcagggtcgcttccgccagaacctgctgggtaag
cgtgtggactactctggccgttcggtcattattgttggtccgcagctgaagatgcacgag
tgtggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgcctc
gtggacaatgagtacgcgcagaacattaagtcggcgaagcgcatggtggagcgccagcgc
cctgaggtgtgggacgtcctcgaagaggcgatttccgagcacccagtgctgctgaaccgt
gcaccaaccctgcaccgccttggcattcaggcgttcgagccgaagctggtcgagggtaaa
gcaatccagctgcacccgctggcctgtgaggcgttcaacgctgacttcgacggtgaccag
atggcagtccacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtccccggcatccggcaagccactggcgatgcctcgcctggac
atggtgaccggcctgtacttcctgaccatggaaaagggcgaggacgagatcggcggcgag
ggtcgtttcaccccagccgacgagaacggcccagccaagggcgtgtactcctcctaccgt
gaggccatcatggcttacgacctgggtgtacttggcctgcaggcaccgatcaaggtgcgc
atcgaccacctgcgtccgacgattgagattgaggctgagcagttcccagacggctggtcg
aagggccaggcttggatgatggagaccacccttggtcgcatcatgttcaacgagctgctt
ccgttcaacttcccgtaccaggaaggcgcgatggtccgtaagggcggcggcgctggcaag
gtgctgttgggcgacatcatccagtcgatggtggagaagtacccaatgattaccgttgcc
cagacgctggacaagctgaaggacgccggtttctactgggcgacccgttccggcgtgacc
atctccatgtccgacgtgttggtgcttccgaacaagacggaaatccttgagcagtacgag
cagcgcgccgaggagatcgagcgcaagtactgggagaagggtgccctgaccgaggagaac
cgctacgaccgtctcgtggagctgtggcaggacgccaccaaccaggtcggtgaagcagtt
gaggcgctgtacccggatgacaacccgattccgatgatcgtgaagtctggtgctgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggtcgtgaactcgcgcggt
gagtacatcacccgcccgatcaagacctccttccgcgaaggcctgacagtgatggagtac
ttcaacaactcccacggttcccgaaagggcctggcggatacggcactgcgtaccgcagac
tccggctacctgacccgccgtcttgtcgacgtcgcccaggacgtcatcgtccgcgagcac
gactgcggcacccgccagggagtcaaggttccagttgcgcagcttgccggtgagaagttc
gtccgcgacgagttcgtcgagacctccgtcgctggccgagtactggcatccgacgcgaag
gacgccgagggcaacgttgtgctcgaagccgacgctgagctttcggaagagcgtatcgac
gccctcgtcgccgccggtgtcgaggaagtcaaggtccgctccgtcctgacctgccagacc
ccaaccggcgtctgcgcgaagtgctacggcaagtccatggcatccggcaagcttgtcgac
atcggtgaagccgtcggtatcgtggctgcacagtcgattggtgagcctggtacccagctg
accatgcgtaccttccaccagggtggtgtcggtggcgacattaccggtggtctgccacgt
gttcaggagctgttcgaggcccgcgtgccgaagaactgcgccccgatcgcatccgtggcc
ggcaccgtcaccctcgaagacgaaggcaacttctggacgctcaccatccacccggatgac
ggctccgacgttgtggtctacgagaagctgtcgaagcgccagggcctcgcacaggtccgc
cgcccgatggagtccaacccgaacgcgatgatcgagcgctccctgcgtgaaggcgaccac
gttaacgtgggcgaccgcctcctgcgtggcgctgctgacccgcacgacgtgctcgaggtc
ctcggccgccgtggcgtggaaaagcacctcatcgacgaagtgcaggccgtgtaccgcacc
cagggtgtgtccatccacgacaagcacatcgagatcatcatccgccagatgctgcgacgc
ggcaccgtcatcgactcgggtaccaccgagttcctgccgggtacgctcgtggacctgtcg
gaggcacgccaggtcaacgctgcggctgttgcagatggtggcgagccagcagagatgcgc
tccgagatcatgggtatcaccaaggcctccctggcaaccgagtcctggctgtccgccgcc
tcgttccaggagaccacgcgtgtgctcacggacgctgctatcaacaagcgttctgaccag
ctgatcggtctgaaggagaacgtgatcatcggtaagctgatcccggctggtaccggtatc
tcgcgctaccgcaacatcacggtcaagccgacggaagccgcccgctccgccgcctactcg
atcccgtccttcggcgacggcatctacggcgacgaggcatacggcgactacaccggcgcc
tccgtcccactggaggaatacgggtacgaccagatctag
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