Corynebacterium pseudogenitalium: KBP54_05420
Help
Entry
KBP54_05420 CDS
T08714
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cpsl
Corynebacterium pseudogenitalium
Pathway
cpsl03030
DNA replication
cpsl03410
Base excision repair
cpsl03420
Nucleotide excision repair
cpsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KBP54_05420 (polA)
03410 Base excision repair
KBP54_05420 (polA)
03420 Nucleotide excision repair
KBP54_05420 (polA)
03440 Homologous recombination
KBP54_05420 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpsl03032
]
KBP54_05420 (polA)
03400 DNA repair and recombination proteins [BR:
cpsl03400
]
KBP54_05420 (polA)
Enzymes [BR:
cpsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KBP54_05420 (polA)
DNA replication proteins [BR:
cpsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KBP54_05420 (polA)
DNA repair and recombination proteins [BR:
cpsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KBP54_05420 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBP54_05420 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UUA88380
LinkDB
All DBs
Position
1124281..1126884
Genome browser
AA seq
867 aa
AA seq
DB search
MAFRAFYALPAENFSTTGGQTTNAVYGFLSMFANVVAQEAPTHIGVAFDVGRKTFRTERF
PEYKAQRESTPPEFKGQVPLIQECLEDLGIISLSKENFEADDIVATLVHLARADQDFEIV
LVSGDRDYLQLVDDSTTLLYPMRGVSTMTRFTPDKVEEKYGLTPAQYPDFAALRGDPSDN
LPSVPKVGEKTATKWITQYGSLAELVNHADEIKGVAGQNFRDRIEQVQLNRELTQMVTDV
ELPVTPNDLELKTVDIGAIAKRFDSLEFGTNLRERVLSALPTEGDAEEHLPVELPEVVID
EGPLDAWIASHRGQGLALYVDGSPLPANGDATAIGIVDKERHGIQRETAELTPEEDVALK
DWLESDDPKYLHNGKAMYHMLRGRGITLSGIAHDTAIAAYLLRPGQRTYALADVYQRHLQ
RQLDVGQEQLSLLDQTSQVDAAVAVLELAQHLAQELREIDSYALYADLELPLVPILARME
DVGVAVDIEALENLRKEFTDKVAQVEGEARTLVDEPALNLSSPKQLSVVLFDKLDLPKTK
KTKTGYSTAAKEIEALAEKNPHPFLDHLLAHREYQKMKSTIEGLIKAVHSDGRIHTTFNQ
TVTSTGRLSSTDPNLQNIPVRTETGQKIRAAFTVGKGYEYLLTADYSQIEMRVMAHLSGD
KGLISAYKDGEDLHNYVGSQVFDVAIDAVTPELRRRVKAMSYGLVYGLSAYGLAAQLSIS
PGEAKEIMESYFHRFGGVKHYLDSVVEKARKDGYTATVFGRRRYLPELNSDNRVARENAE
RAALNAPIQGTAADIIKVAMIHVDRALADYESRVLLQVHDELVVEVAPGELDEVREIVER
EMDRAIELNVPLEVSTGYGENWQDAGH
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcgagcgttctacgctctgcctgctgaaaacttttcgacgaccggtggccaa
acaacgaatgcggtgtatggcttcttgtcgatgttcgccaacgttgtggcgcaagaagca
ccgacgcatattggtgtggcgttcgatgtggggcgcaagacgtttcgaacggaacgtttt
ccggagtacaaagctcagcgcgaatccactccgccagagtttaaggggcaggttccgctg
attcaggagtgtcttgaggacctcggaatcatcagcttgtcgaaggagaattttgaagct
gacgatatcgtggcgacgctggtgcacctggctcgcgctgatcaggatttcgaaattgtc
ttggtttcaggggaccgtgactacctacaactggtagacgattcaacgacgctgttgtac
ccgatgcgcggggtttcgacgatgacacgtttcactccggacaaggtcgaggagaagtac
gggctgactccggcacagtatccggattttgcggcgcttcggggagacccgtctgataac
ctcccctcggttccgaaggtcggggagaagacggcgacaaagtggatcacgcaatacggt
tcgcttgcagaactcgttaaccacgcggatgaaatcaagggagtcgcaggtcaaaacttc
cgagaccgtatcgagcaagtgcagctcaatcgtgaactcacgcagatggtcaccgacgta
gagctccctgttacgccaaatgacttggagctaaagaccgtagacatcggtgctattgcg
aagcgatttgattctttggagttcggcacgaatcttcgcgaacgtgtgctatccgcgctt
cctacggaaggggacgccgaagagcatttgcctgtggagcttccagaagttgtgatcgac
gaagggccgttggacgcatggatcgcttcccataggggtcaaggattagcgctgtatgtg
gacggtagtccgctgccggcaaacggcgatgctactgcgattgggatcgtcgataaggag
cggcacggcatccaacgcgaaacagcggagctaacccctgaagaggatgttgcgctgaag
gactggttggagtcagatgaccccaagtacctccacaacggtaaagctatgtatcacatg
ctgcggggcagaggtatcacactcagcgggattgcgcatgacacagcgattgctgcctac
ctgcttcgcccggggcagcgcacctatgcgctggctgatgtataccagcgtcacttgcag
cgacagttggacgtagggcaagagcaactcagtctgttggatcaaacttcacaggttgat
gccgccgttgctgtgctggaactggcgcaacatcttgctcaagaacttcgtgaaatcgac
tcttacgcgctgtacgccgaccttgagctgccgcttgtacccattcttgccaggatggag
gacgtcggtgtggctgttgatatcgaagctcttgaaaatcttcgcaaggagtttactgac
aaggttgcccaggtagaaggagaggcccgcacgcttgtcgacgagccagctctcaacctt
tcgagtccgaagcagctttctgtcgttcttttcgacaaacttgacttgcctaaaaccaag
aaaacaaagactgggtattcgacggcagccaaggagatcgaggcgcttgcagaaaagaat
ccgcatccgttccttgatcatctgttggcacatcgtgaatatcagaagatgaagtccaca
atcgaggggcttatcaaggcggtacacagtgatggccgaattcacacaaccttcaaccaa
accgtgacttcaacgggccgactgagttcgactgatccaaacctgcagaatattcccgtc
cgtacagagacaggtcaaaagattcgagcagcattcaccgttggtaaggggtatgagtat
cttctgaccgctgattactcacagattgagatgcgagtgatggcgcacctgtccggggac
aaggggctcatctccgcgtacaaggatggcgaagacctgcacaactacgtcggttcacag
gtatttgatgttgctatcgacgccgtgacgcccgagctacgccgtcgggtcaaggcaatg
tcatatggtttggtttatgggctctctgcgtacggcctcgccgcgcagctctcgatctcg
ccaggtgaagccaaggaaatcatggagagttatttccaccgtttcggtggggtgaagcac
tatctggactcggtcgtcgagaaagccagaaaagatggatacacggcaactgtgtttggg
cgccgacgctacctgcctgagctcaacagcgacaaccgagtcgcccgagaaaatgctgag
cgggcggccctgaatgctcctattcaaggtactgccgcagacatcattaaagtagcgatg
attcacgttgaccgagcgttggctgattacgagtcccgtgtgctgttgcaagtgcatgac
gagttggttgttgaagtcgctccgggtgagctcgatgaagtgcgtgagattgttgagcgg
gagatggatcgcgctattgagctcaacgtgccgctcgaggtttctaccggatacggagag
aactggcaagatgctggccattaa
DBGET
integrated database retrieval system
