Corynebacterium pseudogenitalium: KBP54_05435
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Entry
KBP54_05435 CDS
T08714
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cpsl
Corynebacterium pseudogenitalium
Pathway
cpsl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KBP54_05435 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpsl03400
]
KBP54_05435 (uvrB)
DNA repair and recombination proteins [BR:
cpsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBP54_05435 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KBP54_05435 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AIG1
DUF87
nSTAND3
Helicase_RecD
AAA_5
Apolipoprotein
Sigma54_activat
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UUA88276
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All DBs
Position
1129699..1131798
Genome browser
AA seq
699 aa
AA seq
DB search
MAFAAEHPVLAHSEFRPVGEIERREKPFEVVSEFEPSGDQPKAIAELDERLNRGEEDVVL
MGATGTGKSATAAWLIEKQQRPTLVMAPNKTLAAQLANELRQLLPNNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSATSALLSRRDVVVVSSVSCIYGLGTPQSYLDR
SVVLRVGEEVERDRFLRLLVDIQYERNDIDFKRGTFRVKGDVVDIIPAYEEVAVRVEFFG
DEIDSLYYIHPLTGDVLSQEDELRIFPATHYVATEERMEKAIESIKEELADRLEDLENRG
KLLEAQRLRMRTEYDLEMIQQVGFCSGIENYSRHMDGREAGSAPATLIDYFPEDFLTIID
ESHVTVPQIGGMFEGDMSRKRNLVEFGFRLPSAVDNRPLTFDEFESRVGQTVYMSATPGD
YELEAAHGEFVEQVIRPTGLVDPKVTVKPTKGQIDDLIDEIRVRVEKNERVLVTTLTKRM
AEDLTDYLLDNGVKVRYLHSDIDTLQRVELLRQLRLGEFDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSTKSLIQTIGRAARNVSGEVIMYADQVTESMEEAISETERRREIQLAY
NKEHGIDPQPLRKKIADILDQVYENTDGEAENGVASDTAVVSKPDVSEMASDQVQALIDD
LTKQMGAAARELKFELAGRLRDEIADLRKELRGMKDTGN
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgcagcagagcatccggtcctagcacattcggagtttcgaccagtaggcgag
atcgagcgtcgtgaaaagccctttgaagtcgtctcggagtttgagccatcgggtgatcag
cctaaagcgatcgcagagctagatgaacgtctcaaccggggagaagaagacgtcgtcctc
atgggtgccaccggcaccggcaagtcggcgacggcagcgtggctgattgaaaagcagcag
cgcccaacgctcgtgatggctccgaacaagacgctcgccgcgcagctagcaaatgagctt
cggcagctcctcccaaataacgcggttgagtacttcgtctcgtactacgactattaccaa
ccagaggcatatatcgctcagacggatacatacatcgaaaaagattcctccattaatgat
gatgtggaacgcctgcgtcactcagctacctccgcattgctgtcgcgtcgtgacgtagtg
gtggtgtcgtcagtctcttgtatctacggccttggtacgccgcagtcctaccttgatcgc
tctgtggtgctgcgcgtgggggaagaggttgagcgtgaccgcttccttcgattactcgtt
gatatccagtacgagcgcaacgatattgacttcaaacgcggtacgttccgagtaaagggc
gacgtcgtcgatatcattcctgcgtatgaggaagtcgcggttcgggttgagttcttcgga
gacgagattgacagcttgtattacattcatccgctcacgggagacgttctgagccaagaa
gatgagcttcggatctttcctgctacccactacgtggccactgaagagcgaatggaaaag
gcgatcgaatccatcaaagaagagcttgcagaccgtttagaggaccttgagaaccgcgga
aaactacttgaggctcagcgacttcggatgcgcaccgagtatgacctcgagatgattcag
caggttggcttctgctcaggcattgagaactattctcgtcacatggacgggcgcgaggca
ggatcggcgccggcgacgctcatcgactacttcccggaagacttcctcacaattatcgac
gagtcccacgtgaccgtcccgcaaattggaggaatgtttgaaggcgatatgtcgaggaag
cgcaacctcgtggaattcggattccggctgccgagtgccgtcgacaaccgtccgttgacc
ttcgatgagtttgaatcgcgcgtggggcagacggtgtacatgtccgcgacaccgggcgat
tacgagctcgaagcagcacacggcgagtttgttgagcaggttattcgcccaacaggcctc
gtcgatccaaaggtcacggtgaaaccgacgaagggacaaatcgacgacctgattgacgag
attcgcgtccgggtggagaagaacgagcgcgtgctggtcactaccttgacgaagcgcatg
gctgaggacttgactgattatctcctggataacggggtaaaggtgcgctacctgcactct
gacattgatacgttgcagcgcgttgagctgctccgccagctgaggcttggagagtttgac
gtcctcgttggcatcaacctgctgcgagagggtctcgacttgccggaagtttcacttgtt
gcaattctcgacgccgacaaggaagggttcctgcgttcgaccaagtcgctgattcagact
atcgggcgcgcagctcgtaacgtatctggagaggtcatcatgtacgccgaccaggtcact
gagtcgatggaggaagcaatcagtgagacagagcggcgtcgcgaaattcagttggcgtac
aacaaagaacatgggatcgatccgcagccgctgcgcaagaagattgccgacattttggat
caggtatatgagaatactgacggtgaagctgaaaatggcgttgcctcggataccgcagtt
gtatcgaagccagacgtgtccgagatggcctctgatcaggtacaagcattgatcgacgac
cttacgaagcaaatgggtgcagcagctcgcgagttgaagtttgagctcgccggcagactg
cgtgatgaaattgctgatctccgaaaggaacttcgtggtatgaaagatacaggaaactaa
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