Corynebacterium pseudogenitalium: KBP54_06810
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Entry
KBP54_06810 CDS
T08714
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cpsl
Corynebacterium pseudogenitalium
Pathway
cpsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KBP54_06810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpsl03019
]
KBP54_06810
Messenger RNA biogenesis [BR:
cpsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KBP54_06810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Amidase
Motif
Other DBs
NCBI-ProteinID:
UUA86479
LinkDB
All DBs
Position
complement(1408514..1410526)
Genome browser
AA seq
670 aa
AA seq
DB search
MNEPRTRSRKVTRKAGPPEATEQKPVFQAPKQAAGTASNEDDKGSEKSQRDNKSRNSNGN
GGNGRNRRRGRGRGNNGGGRRNPVKSMQGADLTKRLPAPPKAPKGTLRIYALGGISEIGR
NMTVFEYNGRLLIVDCGVLFPNSGEPGVDLVLPDFGPIEKKLDKVEALVVTHGHEDHIGA
IPWLLKLRPDIPIYSSRFTNALIAAKTKEHRQRPKLHEVNKDSSVNLGPFHVRFWHVNHS
IPQCLGLSIKTGAGHVVMTGDVKVDQTPYDGMPTDLPALSRYGDEGVDLFMCDSTNATVP
GISASEAGIEETLTRLVSQAKQRVVIASFASNVARVQMAVNAAVANGRKVAFNGRSMLRN
MEIAEKMSLLKAPKNTIIPIEEAAKMAPHKVVLITTGTQGEPMAALSRMSRREHRQITIR
DGDMIILSSSLIPGNEEAVFAAINNLAQIGATVVTNSEAHVHASGHGYAGELLFLYNAAR
PTCAMPVHGEWRHMRANKELAIATGVKPENTALAQNGVVVDMTKGKIKVVGQYQVGQLYV
DGATMGDVDPDVLADRSSLASGGVVSITCVIDDRTSSLIEVPRVSTTGFSEDDRDFNKKV
VERVQEVMGDLAAEGENDPYRMVQQLRRQLSRTIEQKYKREPVILPTVVPTAADIGPAED
ADVQATRESL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaccccgtacacgctcacgcaaagtgacgcgtaaagcagggccacctgaggcc
actgaacagaagccggtgtttcaggcaccgaagcaggccgcaggaactgcaagtaatgaa
gatgacaagggctctgagaagtcacagcgggataacaagtcccggaactcgaacggaaat
ggcggtaacggcaggaatcgccgccgcggccgtggacgcggtaacaacggcggtggccgc
cgtaacccggtgaagtcgatgcagggcgcagacttgacgaagcgcctcccggctcctccg
aaggcaccgaagggaaccctgcgtatttacgccttgggtggtatttccgaaatcggtcgt
aatatgacggtgtttgaatacaacggacgcctgctcatcgttgactgtggtgtgctgttc
ccgaactccggtgaaccaggcgttgatcttgtgctgcctgactttggtccgattgaaaag
aagttggacaaggtcgaggccctggttgtcactcatggacatgaagaccacattggcgca
atcccgtggctgttgaagctgcgcccggatatcccgatttactcgtcgcgtttcaccaat
gcgctgattgctgcgaagacgaaggagcaccgtcagcgtccgaagttgcatgaggtgaac
aaggattcttccgtcaacttgggcccattccacgtgcgtttctggcacgtgaatcactcc
attccgcagtgtctcggcctgtctattaagaccggcgcgggtcatgttgtgatgactggt
gatgtcaaggtggaccagactccgtacgacggaatgccgacggacctgccggcgctgtcg
cgttacggtgacgaaggcgtcgatctgtttatgtgtgactccacgaacgctacggtgccg
ggtatttctgcatccgaggccggtatcgaggagacactgacgcgtttggtgagccaggcg
aagcagcgcgttgtgattgcttcgtttgcttccaacgttgctcgcgtccaaatggcagtc
aacgcggctgtagcgaatggtcgcaaggttgccttcaacggccgctccatgttgagaaat
atggaaatcgccgagaagatgagcctgctgaaggctccgaagaacacgattatccctatc
gaagaagctgccaagatggcgccgcataaggttgtgctgatcacaacgggtacgcagggc
gagccgatggctgcgctttcgcgtatgtcgcgccgtgaacaccgccagatcaccatccgc
gacggtgacatgatcatcctgtcgtcttccctgatcccaggtaatgaggaagctgtgttc
gcggcgatcaacaacctcgcacaaatcggtgcgactgtggtgacgaactccgaagctcat
gtccacgcttctggccacggctacgccggtgagcttctcttcctgtacaacgcagcacgc
ccgacttgcgctatgcctgtgcacggtgagtggcgccacatgcgcgcgaacaaggagctc
gctattgcgaccggtgtgaagccggagaataccgcacttgctcaaaatggtgttgtggtt
gacatgacgaagggcaagatcaaggttgttggccagtaccaggtcggacagctttatgtt
gatggcgcgacgatgggcgacgtagacccggacgtgctggcagaccgcagctcgcttgcc
tcaggtggcgttgtctcgattacctgcgtgatcgacgaccgcacgagtagcctcattgag
gtaccgcgcgtctccaccactggtttctctgaagacgaccgtgacttcaataagaaggtc
gtcgagcgtgtccaggaagttatgggtgatttggctgcagaaggggagaatgacccgtac
cgcatggtgcagcagcttcgtcgtcagctctcgcgaacgattgagcagaagtacaagcgt
gagccagtcattcttccaaccgtggttccaaccgcggcggatattggaccggcagaagac
gctgatgttcaagcaacacgagagtcgctttaa
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