Corynebacterium pseudogenitalium: KBP54_06835
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Entry
KBP54_06835 CDS
T08714
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cpsl
Corynebacterium pseudogenitalium
Pathway
cpsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KBP54_06835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpsl03019
]
KBP54_06835
03016 Transfer RNA biogenesis [BR:
cpsl03016
]
KBP54_06835
Enzymes [BR:
cpsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KBP54_06835
Messenger RNA biogenesis [BR:
cpsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KBP54_06835
Transfer RNA biogenesis [BR:
cpsl03016
]
Prokaryotic type
tRNA degradation factors
KBP54_06835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
KH_2
KH-I_KHDC4-BBP
RNase_PH_C
OB_cyt-4
MnmE_helical
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UUA86484
LinkDB
All DBs
Position
complement(1413758..1416076)
Genome browser
AA seq
772 aa
AA seq
DB search
MIARRSKERDQLSSFKPRNSYEIHVDEEYGVTEAVASLDNGDFGSRTIRFETGQLARQAD
GSVTTYLDDDTMMLATTTASNNPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTE
AILACRLIDRPLRPTFVKGLRNEVQVVITVLSIAPEEYYDVVAINGASAATQLSGLPVSG
PVGGVRMALIADDKHPEGQWVAFPNHEQHQRAIFEMVVAGRIVERKRGRKTEADVAIMMV
EAGAGANVVKLIADGAPAPTEETVADGLEAAKPYIKTLCEAQRDLAAQFDKERKEFPLFP
AYTDEVFEAVEKKASKKLASFLTIAGKQEREEKINAYIEDIEEDVLDRLDVDEDDDDVAA
VVKEIRAAYNALQKEIVRGKILKDGYRIDGRSVTAIRDLGVEVELVPRAHGSALFERGET
QILGVTTLDMLKMEQPIDSLSPETSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAE
RALLPVIPSREDFPYTIRQVSEALSSNGSTSMGSVCASTLSLYNAGVPLAAPVAGIAMGL
VSGDVDGETKYVALTDILGAEDAFGDMDFKVAGTREFITALQLDTKLDGIPSDVLASALK
QAHDARETILDTMAEVIDSPDDMSSLAPKITTVKVPVSKIGEVIGPKGKMINSITEETGA
DISIEEDGTVYVSATSGEAADAAIDKINAIANPQLPKVGEHYLGTVVKTVAFGAFVSIVP
GTDGLIHISNLGGNKRIEKVEDVVNVGDKIEVEIRDIDNRGKISLVPVEQDK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcccggagatccaaggagagggatcaattgagcagttttaagccgagaaattcg
tacgaaatccacgttgatgaagagtatggggttaccgaagcagtagcgtcgctcgacaat
ggtgatttcggttctcgcaccattcgttttgagacgggccagttggctcgccaggcagat
ggctcggtgacgacctacctggacgatgacaccatgatgcttgcgacgacgacggcgtcg
aataacccccgcgaaggctttgatttcttccctctgaccgttgatgtcgaggagcgaatg
tatgccgcgggccgtatcccgggctcgttcttccgccgcgaaggccgcccatccaccgag
gcgatcctggcttgccgtctcatcgaccgcccactgcgcccaaccttcgtgaaggggctg
cgcaacgaggttcaggtcgtgattaccgtcctgtcgatcgccccggaagagtactacgac
gttgtcgctatcaacggagcttccgcggcaacgcagctttctggcctgccggtttccggc
cccgttggtggtgtgcgtatggcattgatcgctgacgataaacacccagaaggccagtgg
gttgcattcccgaatcacgagcagcaccagcgtgccatcttcgagatggttgttgcgggc
cgcattgttgagcgcaagcgtggccgtaagacggaagcggatgttgcaatcatgatggtt
gaggcaggagctggcgcgaacgtcgtcaagctgatcgctgacggcgcacctgcacctacc
gaggaaaccgtcgcagacggtctggaggctgcgaaaccgtacatcaagacgctgtgtgag
gcgcagcgcgaccttgcagctcagttcgacaaggaacgcaaggagtttccgctattcccg
gcatacaccgatgaggtgtttgaagcagtggagaagaaggcatcgaagaagctcgcttcc
ttcctgaccatcgctggcaagcaggagcgcgaagagaagatcaacgcgtacatcgaggac
atcgaagaagatgtgcttgaccgcctcgacgtcgacgaagatgacgacgatgttgctgct
gtggtgaaggagattcgcgcggcgtacaacgcactgcagaaggagattgttcgaggcaag
atcctgaaggatggctaccgtatcgacggtcgcagcgtgaccgcgatccgtgaccttggt
gttgaagtcgaactcgtcccgcgtgcgcatggttcggcactgttcgagcgcggcgagacc
cagatccttggtgtgacgacgcttgacatgctgaagatggaacagccaatcgattcgctg
agccctgagacttcgaagcgttacattcaccactacaacttcccaccgtattcgactggt
gaaacaggtcgtgttggctccccgaagcgccgcgaaatcggtcacggtgcgcttgcagag
cgcgcgttgttgccagtgataccttcgcgcgaagacttcccgtacacgattcgccaggtt
tctgaggcgctgagctccaacggttcgacgtcgatgggctccgtgtgcgcatcgacgttg
tcgctgtacaacgctggtgtgccactggctgctccggtcgcgggtattgcgatgggcctt
gtgtcgggtgacgtcgatggtgagacgaagtacgtcgctctgacggacattctgggcgcg
gaagatgcgttcggcgatatggacttcaaggtggcaggcacccgcgagttcatcaccgcc
ctgcagcttgataccaagctggacggcattccttctgacgtgctcgcttcggctctgaag
caggcgcatgatgctcgagagaccatcctggacacgatggcagaggtcattgattcgccg
gatgacatgagctcgttggcgccgaaaatcaccacggtgaaggttcctgtttccaagatt
ggtgaggtcattggcccgaagggcaagatgatcaactcgattaccgaggaaaccggcgcg
gacatctcgattgaagaggacggaaccgtgtacgtctcggcaaccagtggcgaagcagca
gacgccgcgatcgacaagatcaacgcaattgctaacccacagttgccgaaggtaggcgag
cactacctgggtaccgtggtcaaaaccgttgcattcggcgcgttcgtttcgatcgtcccg
ggaaccgacggcctgattcatatctcgaacttgggtggcaacaagcgcatcgagaaggtc
gaggacgttgtcaacgtcggtgacaagatcgaggtcgagattcgtgatattgataatcgc
ggcaagatctcccttgttcctgttgagcaggacaagtag
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