Chlamydia psittaci M56: B602_0145
Help
Entry
B602_0145 CDS
T02310
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cpsm
Chlamydia psittaci M56
Pathway
cpsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B602_0145 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsm03021
]
B602_0145 (rho)
03019 Messenger RNA biogenesis [BR:
cpsm03019
]
B602_0145 (rho)
Transcription machinery [BR:
cpsm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B602_0145 (rho)
Messenger RNA biogenesis [BR:
cpsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B602_0145 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
S1CSD-TOTE-2
OB_RNB
AAA
Mor
DUF5855
NACHT
Motif
Other DBs
NCBI-ProteinID:
AFS24599
LinkDB
All DBs
Position
137572..138966
Genome browser
AA seq
464 aa
AA seq
DB search
MKEERSSEVLPKVKENRKHACPGLQEKSFAGECAIVADVVNENQPVTITKIAKLQRMGIE
ELNVLARQYGVKNIGSLTKSQVVFEIVKAKSERSDELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNERIVMEMGKEHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELEKVYLFRQAIADLTAIDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaacgttcttcagaagtcttgccaaaggtcaaagagaatagaaaacatgcg
tgtcctgggttgcaagagaagtcttttgcgggagaatgtgcaatagttgcggatgtagtt
aatgaaaaccagcctgtaactattacaaaaattgccaaattgcaaaggatgggaattgaa
gagcttaatgtattggctcgtcaatatggagtgaagaacatcgggtctctcactaaatct
caagtggtatttgagatcgttaaagcaaagtctgaacgttcagatgagcttttaatcggg
gagggggttttggaagttcttcctgatgggtttggctttttaagatcacctacttataac
tatctcccttctgctgaagatatttatgtttccccggctcaaatccgcagatttgatttg
aagaagggagacacaattataggcacaatacgttctccaaaagagaaggaaaagtatttt
gccttattaaaggtagataagattaatggatctaccccagacaaagctaaggaacgagtt
ttattcgaaaacttgacccctctatacccgaatgaaagaattgttatggaaatggggaag
gagcacctcgctgaacgggtgttagatcttacggctcccatagggaaagggcaaagggga
cttattgtagctcctccacgttctggaaagacagtaattttacagagcatagcgcacgct
attgcagtcaataaccctgatattgttctcattgttttgttaattgacgagcgcccagaa
gaagttactgatatgattcgacaggtgcgtggtgaagttgttgcttctacatttgatgag
cagcctgaaagacatattcaagttgcagaaatggttatagaaaaggctcgacgtttagtt
gaacacggaaaggatgtagtgatccttcttgattctattacacgtttagcgcgagcttac
aataccgtgcaaccacattctgggaagattttaacaggaggcgtagacgctagtgctcta
cataagcctaagagatttttcggagcagcaagaaatatcgaaggcggcggatcattaacc
atcttagctactgcgttgatagatactggttctagaatggatgaagtcatttttgaggag
ttcaaaggtacaggaaatatggaactggtactagatcgtcgtctttctgatcgaagaact
taccctgcaattgatcttattaagagtggtacaagaaaagaagaattactttatcaccct
agtgaattagaaaaagtttaccttttccgacaagcaattgctgatcttactgctattgac
gctatgcatctgttgttaggtagattaaaaaagacaaatagtaacgcagaatttttactt
tctttaaaagaatag
DBGET
integrated database retrieval system
