Corynebacterium pseudopelargi: CPPEL_02710
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Entry
CPPEL_02710 CDS
T07012
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cpso
Corynebacterium pseudopelargi
Pathway
cpso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPPEL_02710 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpso03019
]
CPPEL_02710 (rng)
03009 Ribosome biogenesis [BR:
cpso03009
]
CPPEL_02710 (rng)
Enzymes [BR:
cpso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CPPEL_02710 (rng)
Messenger RNA biogenesis [BR:
cpso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CPPEL_02710 (rng)
Ribosome biogenesis [BR:
cpso03009
]
Prokaryotic type
rRNA processing factors
CPPEL_02710 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
DnaJ_CXXCXGXG
TcdA_TcdB
HAM1_C
Motif
Other DBs
NCBI-ProteinID:
AZA08673
UniProt:
A0A3G6ISV6
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All DBs
Position
561283..563967
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AA seq
894 aa
AA seq
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MAQGKPGRPRTRPEPKAVDPQQVAAKAKQFDREGIEEKTRVWALARELDATSPYVVEALH
AIGIVKVAQAALTPAEVTRLLDHLAGDGHTPGDDDKLRHRVEKNVENEIEQIKQKVDREL
EAEVVTPPEQAPIIAPAEVEKPAPVAAAIPVFMPPQPLEVVEEAEEEDEDTAAKKRRRGR
RGTGRGRKQEERSEEVEQIEEPKAIAGSTRLEAQRRRRAEMRDEQRKKRHIVSEAEFLAR
RESVERTMVVRERERTDHPGTVTQVGVLEDGMLVEHFVTSETQASMVGNIYLGRVQNVLP
SMEAAFIDIGQGRNAVLYAGEVNWRSLGLGGRGRRIEQAFHPGDQVLVQVSKDPVGHKGA
RLTMQVSLAGRYLVYVPGGRSAGISRKLPAGERSRLKKILKEVMPAHGGAIIRTAAEGVH
EDQIAADVKRLDTLWNQLSQRAETQREAKSSQPVTLYEEPNMLVKVVRDLFNEDFHKLIV
DGKRSWNTVHAYVQSVAPELLERLEHFDRSEHDGRDAFEEYRVDEQIKKALSRKVWLPSG
GTLVIDRTEAMTVIDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQMRLRDLGGMIVVDF
IDMVLPENQDLVLRRLTEALGRDRTRHQISEVTSLGLVQMTRKRLGTGLLETFTTECEHC
EGRGVIIHDDPIEEVEEPKKARKKHDHGVRHQDPKRHPAVVAMHKEEEDKPTLEELASAV
VLVEDDAEQEEQTTKRSKRKRRGNRRTQRSEAPKASAEEIAHAALDKAEAEEPDEPSGRD
HLPGTYEEAKQQFEASPRRKRRVRGNSRSDHEPKPEDFKPDTPEPKVAAPTPQEEHTPEV
KVVSRKGRRRAIRRSQPQQAARPQQQSPEQEKPETSQVQHPRRGRRRATRRARR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaaggtaaaccaggtcgcccaagaactcgccctgaacccaaggcggtagaccca
cagcaagttgcagcaaaagccaagcaattcgatcgtgaaggcatcgaagaaaaaactcgc
gtctgggccttggcccgcgagcttgatgccacctccccctatgtggttgaggctttgcac
gccatcggcattgtcaaggtggcccaagcagcactcaccccggcagaagtaacccgtttg
ctcgatcaccttgcaggcgatgggcacacacccggcgatgacgataaattgcgtcaccgc
gtggaaaagaacgtagaaaacgaaatcgagcagatcaagcaaaaagttgatcgcgaactc
gaagcagaggtcgtcaccccaccggagcaggcgccgatcattgccccggctgaggtggaa
aagcctgcccctgtcgctgccgccatcccggtgtttatgccgccgcagccacttgaggtg
gtagaagaagccgaggaagaagacgaagacaccgcagcaaagaagcgtcgccgcggccgc
cgcggaaccggacgtgggcgtaaacaagaagagcgcagcgaagaagtcgagcagattgaa
gagcccaaagccatcgcgggctctactcgcctggaagcccagcgccgccgccgcgcagag
atgcgcgacgagcagcgaaagaagcgccatatcgtttccgaagctgagttcctcgcgcga
cgtgaatccgtagagcgcaccatggtggtgcgcgagcgcgagcgtacagatcacccagga
acggtgacccaggtgggcgtgctagaagatggcatgctggttgagcacttcgttaccagc
gaaacgcaggcctcgatggtgggcaatatctacctcgggcgcgtgcaaaatgtgctgccc
tcgatggaggccgcattcattgatatcggccaggggcgcaacgccgtgctctacgccggt
gaagtcaattggcgttccctaggccttggtggccgcgggcgccgaattgaacaagccttc
cacccaggcgatcaagtcctggtgcaggtatccaaggacccagtgggccataaaggcgcg
agattgaccatgcaggtttccttggccgggcgctacctcgtctacgtccccggtgggcgt
tctgcgggcatttcgcgcaagctgccggcaggggagcgctcgcgtttaaagaagatcctc
aaagaagtcatgccggcacatggtggagccattatccgcaccgccgccgaaggcgtgcat
gaggatcaaatcgcagccgacgtcaagcgcctggatacgctgtggaaccagctttcccag
cgtgccgaaacgcagcgcgaagccaaatcctcgcagcctgtcaccctctatgaagagccg
aacatgctggtcaaggtggttcgtgacctctttaacgaggacttccacaaactcatcgtg
gatggcaaacgctcctggaataccgtgcacgcctatgtgcagtccgtggcaccagaacta
ctggagcgcctcgagcacttcgaccgcagcgaacatgatggtcgcgatgcattcgaggaa
taccgcgtagatgagcaaatcaaaaaggcgctctcgcgcaaggtatggctaccatccggc
ggcaccctggtgatcgaccgcacggaagcgatgacagtgatcgacgtcaacaccggcaaa
ttcaccggcgctggcggcaatctggaagaaacggttacccgcaacaacctcgaagccgca
gaagagatcgtgcgccaaatgcgcttgagggatctcggcggcatgatcgtggtggacttc
atcgatatggtcttgcctgaaaaccaagacctcgtgctgcgcaggctcaccgaagccctc
gggcgcgaccgcacccgccaccaaatctccgaggtgacctcactcggcttggtgcagatg
acccgcaagcgcttgggcaccgggctgcttgaaacattcactaccgaatgtgagcactgc
gaaggccgcggcgtgatcatccacgatgaccccatcgaggaagtagaagagccgaagaag
gcccgcaagaagcacgatcatggcgtgcgccaccaggatcccaagcgtcaccccgccgtg
gtggccatgcacaaggaagaagaagacaagcccacccttgaagagctcgccagcgccgtc
gtgctggtagaagatgacgcagagcaggaggaacaaactacgaagcgttccaagcgcaag
cgccgcggcaaccgtcgcacccagcgcagcgaagctccaaaggccagcgccgaggaaatt
gctcacgccgctttggataaggccgaggcagaagagcccgatgagccttcaggccgcgat
catttgcctggcacctacgaggaggcgaagcagcaatttgaagcctccccgaggcgcaag
cggcgcgtgcgtggcaattcccgctcagaccacgagccaaagcctgaagattttaagccg
gacacccccgagccgaaggttgctgccccaactccgcaggaggagcacaccccggaggtg
aaggtggtttcgcgcaaggggcgtcgtcgcgctattcgacgcagccagccccagcaggca
gcgcgcccgcaacagcaaagccctgagcaggaaaagcccgaaacttcccaggtgcagcac
ccccggcggggccgtcggcgtgcgacgcgcagggcacgtcgataa
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