Corynebacterium pseudopelargi: CPPEL_09845
Help
Entry
CPPEL_09845 CDS
T07012
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cpso
Corynebacterium pseudopelargi
Pathway
cpso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPPEL_09845 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpso03021
]
CPPEL_09845 (rpoC)
03400 DNA repair and recombination proteins [BR:
cpso03400
]
CPPEL_09845 (rpoC)
Enzymes [BR:
cpso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPPEL_09845 (rpoC)
Transcription machinery [BR:
cpso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPPEL_09845 (rpoC)
DNA repair and recombination proteins [BR:
cpso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPPEL_09845 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AZA10072
UniProt:
A0A3G6IWJ1
LinkDB
All DBs
Position
complement(2061971..2065981)
Genome browser
AA seq
1336 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDLSTLEAEMLLEKKDVEADAESDIAERAQKLEED
LAELEAAGAKADARRKVQNAADKEMQHIRERAEREIDRLEEIWQTFVKLAPKQMIIDESI
YEELIDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELREIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVSGPGNRPLKSLSDLLKGKAGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDFAQNIRSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTMDKAEGELGGE
GAYKPATEDHPAQGVYSSYAEAIMARDRGVLGLQAKIKVRISHLRPPADIEAEQFPDGWQ
QGQTWLADTTLGRVMFNELLPWNYPYLEGVMVRKGGGSDKIMLGDVINDLAAKYPMITVA
QTMDKMKDAGFYWATRSGVTIAMSDVLVLPNKDEMLENYEAEARKIERKYWEQGALTERE
RYDRLVELWKDATDEVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRLGIRVPVAEAVKNAEGKVTSYTGNALIETSVAGRVAATDIKDSEGEVLVAAGENL
TEAAIEKIIAAGVEQIKVRSVLTCQTATGVCAKCYGKSMATGQLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVHLEDEGNFYTL
TITPDDGSDNVVYEKLSKRQGLATVRVPMESNPGAMIERTLAEGDHVEVGDRLLRGPADP
HDVLEVLGRRGVEQHLVDEVQDVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPG
TLVDLSEAKAANAEALASGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDKLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGESVYGDETF
GEFVGKSVPLDEAYDL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgaactccgcatcggcctggccaccgccgacgacatc
cgccgttggtccaaaggtgaggttaagaagccggagaccattaactaccgcacgctcaag
cctgagaaggacggcttgttctgtgagcgtattttcggccccacccgcgactgggagtgt
gcctgcggtaagtacaagcgcgtgcgctacaagggcatcatctgtgaacgctgcggcgtt
gaggtgaccaagtccaaggtgcgtcgtgagcgcatgggccacattgagctggccgcgccc
gtgacccacatctggtacttcaagggcgtgccttctcgcctgggctacctgcttgacctt
gctcctaaggatcttgagcgcatcatctacttcgctgcgaacatcatcaccagcgttgat
gaggaagctcgccacaacgacctgtccaccctggaagctgagatgcttctagaaaagaag
gacgttgaggccgatgcagaatccgatattgcagagcgtgcccaaaagcttgaggaagac
ctcgcagagcttgaggccgcaggtgcaaaggctgatgcgcgccgcaaggtgcaaaatgca
gccgataaggaaatgcagcacatccgcgagcgtgccgagcgtgagatcgaccgcctcgag
gaaatctggcagacctttgtcaagcttgccccgaagcagatgatcatcgatgagtccatc
tacgaagagctcatcgaccgctacgaggattacttcaccggcggcatgggtgctgaggcc
attcagaccctgatccgcaacttcgacctcgacgccgaggccgaggagctgcgcgagatc
atcaacaatggcaagggccagaagaagatgcgcgcgctcaagcgcctgaaggttgtggcc
gcattccagcgttcgggtaacgacccggctggcatggtgctcgactgcatcccagtgatc
ccgccggagcttcgccccatggtgcagctcgacggtggccgttttgccacctcggacctg
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgatctc
ggtgcccctgagatcatcgtgaacaacgaaaagcgcatgctgcaggaatctgtggacgcg
ctcttcgataacggccgtcgtggccgccccgtgtctggtccgggcaaccgcccgctgaag
tctttgagcgacctgctcaagggcaaggctggccgtttccgtcagaacctgctgggtaag
cgtgtggattactccggccgttcggtgattatcgtcggcccgcagctcaagctgcacgag
tgtggtctgcccaagctcatggcgttggagctgttcaagcccttcgtgatgaagcgtctg
gtggaaaatgacttcgcccagaacatccgctccgcaaagcgcatggtggaacgccagcgc
cccgaggtgtgggacgtgctggaagaggccattgcagagcaccccgtgatgctcaaccgt
gcacctaccctgcaccgcctgggtatccaggccttcgagccgaagctggtggaaggtaaa
gccatccagctacacccgcttgcctgcgaagccttcaacgccgacttcgacggcgaccag
atggctgtgcacctgccgctttcggcagaggcacaggcagaggcccgcatcctcatgctt
gcctccaacaacatcctttcgcctgcctcgggtaagcccttggctatgccgcgtctggat
atggtgaccggcctgtacttcctcaccatggataaggccgaaggcgagctcggtggcgaa
ggtgcctacaagcctgctaccgaggatcaccccgcgcagggcgtgtactcctcctatgct
gaggcaatcatggcgcgcgaccgcggcgtgcttggcctgcaggccaagatcaaggtgcgt
atttctcacctgcgtccgccggcagatatcgaggccgagcagttccccgatggctggcaa
cagggtcagacctggttggcagacaccaccttgggtcgtgtcatgttcaacgagttgctg
ccgtggaactacccctaccttgaaggcgtcatggtgcgtaagggcggcggctccgacaag
atcatgcttggcgatgtgattaatgatctcgctgccaagtaccccatgatcaccgtggct
cagaccatggacaagatgaaggatgccggcttctactgggcaacccgttccggtgtcacc
atcgccatgtccgacgtgctcgtgcttcccaacaaggacgagatgctcgaaaactacgag
gccgaggcccgcaagatcgagcgcaagtactgggagcagggtgcgctgaccgagcgcgag
cgttacgaccgcctggtggagctgtggaaggatgccaccgacgaagttggtcaggccgtc
gaggatctgtaccccgacgacaacccgatcccgatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggttgtgaactccaagggt
gactacatcacccgcccgatcaagacctccttccgcgaaggtctttcggtgctggagtac
ttcaacaactcccacggttcgcgtaagggcctggccgataccgcgcttcgtaccgccgac
tccggctacctcacccgtaggcttgtcgacgtcgcacaggacgtcattgtgcgcgaggaa
gactgcggtacccgccttggtatccgcgtgcccgtagccgaggccgtgaagaatgccgaa
ggcaaggtcacttcctacaccggtaacgccttgattgaaacctctgtggctggccgcgtg
gctgccaccgatatcaaggactccgagggcgaagtgctcgttgctgctggtgagaacctc
accgaggctgccatcgagaagatcatcgccgctggtgtggagcagatcaaggtgcgttcg
gtactgacctgccagaccgccaccggcgtgtgcgccaagtgctacggcaaatccatggct
accggccagctcgtcgatatcggcgaggccgtaggcatcgtggctgcacagtccattggt
gagcccggtacccagctgaccatgcgtaccttccaccaaggtggcgtgggtggcgacatc
accggtggtctgccgcgtgtgcaggagctcttcgaggctcgtgtaccaaagaaccgcgcg
ccgatcgcttcggtggccggcaccgtacacctggaagacgagggcaacttctacaccttg
accattaccccggacgatggatccgacaatgtggtctacgagaagctctctaagcgccag
ggtcttgccaccgtgcgcgtgcccatggaatccaacccgggtgccatgatcgaacgcacg
ctggccgaaggcgatcacgttgaggttggcgaccgcctcctgcgcggccctgccgatcct
cacgacgtgcttgaggtgcttggtcgccgcggtgtggaacagcacctggtagacgaagtg
caggatgtgtaccgcgcccagggtgtggccatccacgacaagcacatcgagatcatcatt
cgccagatgctgcgtcgcggcaccgtgatcgagtcgggctccaccgagttcctgcccggt
actctggtggatctctccgaggccaaggcagccaatgccgaggcactggcttccggtgga
cagcccgccgagctgcgtagcgagatcatgggtattaccaaggcctcgctggcaaccgaa
tcctggctctccgcggcctccttccaggagaccacccgtgtgcttaccgatgccgctatt
aataagcgctccgataagctcatcggcctcaaggagaacgtgatcatcggtaagctgatc
ccggccggtaccggcatctcgcgttaccgcaacatctcggtcaagcccaccgaggctgcg
cgcaacgccgcctactccatccccacctatggtgaatccgtctacggcgatgaaaccttc
ggtgagttcgtgggcaagtctgtgccgctcgatgaggcatacgacctctaa
DBGET
integrated database retrieval system
