Corynebacterium pseudodiphtheriticum: L9H27_00025
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Entry
L9H27_00025 CDS
T08839
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cpsp
Corynebacterium pseudodiphtheriticum
Brite
KEGG Orthology (KO) [BR:
cpsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpsp03032
]
L9H27_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
cpsp03400
]
L9H27_00025 (gyrB)
Enzymes [BR:
cpsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L9H27_00025 (gyrB)
DNA replication proteins [BR:
cpsp03032
]
Prokaryotic type
DNA Topoisomerases
L9H27_00025 (gyrB)
DNA repair and recombination proteins [BR:
cpsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L9H27_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
SPDY
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UQV56207
LinkDB
All DBs
Position
5803..7830
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AA seq
675 aa
AA seq
DB search
MANAQPNYDASSITILEGLEAVRKRPGMYIGSTGVRGLHHLIWEVVDNSVDEAMAGYASK
VEVRLLADGGVQVTDDGRGIPVSMHASGAPTVQVVMTQLHAGGKFDSDSYAVSGGLHGVG
ISVVNALSTRVEAAIKRDGKHWYQNFERAVPEELVEGGNARGTGTTVRFWPDPEIFETVK
FDFDTIKRRLQEMAFLNKGLSITLVDERVTAEDLKLEALAEEGETASSFDDPDPEDKAAL
SDKEAVKKIEFCYPNGLVDYVDYLNRTKTSIHPTIISFEAKGEDHEVEIALQWNSGYNQS
VHTFANTINTHEGGTHEEGFRAALTTQMNNYAKTHKLMKEKDGKLTGDDCREGLSAIISA
KVGDPQFEGQTKTKLGNTEIRSFVQRSVNEHLADWFDANPAEAKAIMNKAVASAQARVAA
RRARELVRRKSATDLGGLPGKLADCRSKDPKVSELFIVEGDSAGGSAKAGRESLYQAILP
LRGKILNVEKSRMDKVLKNNEVQAIITALGTGIHEEFDIKKLRYDKIVLMADADVDGQHI
ATLLLTLLFRFMPELVENGHVYLANPPLYKLKWSKGEPGYAFSDRERDAQLKEGFAQNRK
INMDDGIQRYKGLGEMNAKELWETTLDPTTRILRRVDLEDAQKADELFSILMGDDVSARR
SFITRRAKDVRFLDV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtggctaacgcgcaaccgaattatgacgcttcatcaattaccatcctggagggcttggaa
gccgtccgtaagcgccccggtatgtatatcggttctaccggcgtgcgtggcttgcaccac
ctaatttgggaggttgttgataactcggtcgatgaggccatggcgggctatgcctccaag
gtggaggtgcgtttgcttgccgacggcggcgtgcaggttactgacgacggccgtggtatc
ccggtctcgatgcacgcctcgggggcaccaacggtgcaggttgtgatgacgcagctgcat
gccggcggtaagttcgactcggattcttatgcggtttcgggtggtctgcacggcgtgggt
atttccgtcgtcaatgctttgtcgacgcgcgtggaagccgcgattaagcgcgatggcaag
cactggtaccagaattttgagcgcgcggtgccggaagaactcgttgagggcggaaatgcc
cgcggcactggtacgacggtgcgtttttggccggatccggagattttcgagactgtcaaa
tttgatttcgacaccatcaagcgccgcctgcaggaaatggctttcttgaacaagggtttg
tccatcacgcttgtcgacgagcgcgtgacggccgaggatctgaagttggaggcactcgcg
gaagaaggcgagactgccagctctttcgatgatccggacccggaagacaaagctgcgctc
agcgataaagaagccgtcaagaagattgaattctgctacccgaatggcctggtcgattac
gttgactatctgaaccgcacgaaaacctcgatccacccgacgatcattagttttgaagcc
aagggcgaggaccacgaggtagaaatcgcgctgcagtggaacagtggttataaccaatcc
gtgcatacttttgccaacacgattaatacgcacgagggtggtacgcacgaagaaggcttc
cgtgctgcgttaaccacgcagatgaacaactatgcgaaaacgcataagttgatgaaggaa
aaagacggcaagcttactggtgatgactgccgcgagggcttatcggccattatttccgcg
aaggtcggtgacccccagttcgaaggccagacgaagactaagctgggtaacacagagatt
cgctccttcgtgcagcgttccgtcaatgaacaccttgcggattggtttgatgccaacccg
gcagaggctaaagccatcatgaacaaggcggtggcttctgcacaggcacgcgtggcggct
cgtcgtgcgcgtgagttggtgcgtcggaaatcagccactgacctgggtggtttgccaggt
aagttggcagattgccgttccaaggatccgaaggtttccgagctgttcatcgtggagggt
gactccgcaggtggctccgcgaaggctgggcgcgagtcgctgtaccaggcgattttgccg
ttgcgcggcaagattttgaacgtcgaaaagtcccgcatggataaggtgctgaagaacaac
gaggtgcaggcgattatcaccgcgttgggcaccggtatccatgaggaattcgatatcaag
aagctgcgctacgacaagatcgtgttgatggccgacgccgacgtcgatggccagcacatt
gccacgctgctgctgacgctgctgttccgcttcatgccggagctcgtcgagaatgggcac
gtttacttggcgaacccgccgttgtacaagctgaaatggtcgaagggtgagcctggctac
gccttcagtgaccgtgagcgcgatgcccagctgaaagaaggctttgcacagaaccgcaag
atcaacatggacgacggtatccagcggtacaaaggtctgggcgagatgaacgcgaaagag
ctgtgggaaaccacgctggacccaaccactcgtattttgcgtcgcgtggacctggaggat
gcacaaaaggccgacgagctgttttctattcttatgggtgatgacgtttctgcacgtcgt
agcttcattacacgtcgtgccaaggatgttcgcttcctcgacgtctaa
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