KEGG   Corynebacterium pseudodiphtheriticum: L9H27_02995
Entry
L9H27_02995       CDS       T08839                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cpsp  Corynebacterium pseudodiphtheriticum
Pathway
cpsp03420  Nucleotide excision repair
cpsp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    L9H27_02995
   03430 Mismatch repair
    L9H27_02995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpsp03400]
    L9H27_02995
Enzymes [BR:cpsp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     L9H27_02995
DNA repair and recombination proteins [BR:cpsp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     L9H27_02995
   MMR (mismatch excision repair)
    Other MMR factors
     L9H27_02995
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PDDEXK_1 AAA_19 UvrD_C_2 AAA_30 Exo5
Other DBs
NCBI-ProteinID: UQV56725
LinkDB
Position
662759..666193
AA seq 1144 aa
MSNATHTGHKNSGIVSPQLLSEILGQRFAPTEQQAEIIGAEPGPLLVVAGAGAGKTETMA
ARVVWLVANRYALPEEVLGLTFTRKASQELAKRIRDRLQVLRDSPRLPEIDPDGSLRANL
ETIAPRVSTYDSYAGDLVREYGLLLPVEPTSRLITRAHLVSIAQSVVRNYEGKLETDKKE
SSIVTELLDLFERMANNLSFADDFRECARAFAEVEYLPRAPRQRKDLNKDVQNWVDRQQL
RIDYLPMIEQLERELIERNAVTFTQQMSAAAQLAQQHPAVGVSQRRQTKVVMLDEYQDTS
HAQRVLLRNLFGNTPHEGLTVTAVGDPMQAIYGWRGATSENLAQFPQDFPVGAEGDQPAP
SKELTTSWRNPSTVLDIANTVSHAVLGTGPDRPVAPLEPRAGAGAGEVSFGYWPNAEEEI
SWVAGNLHQKYQQYLERNEHDPHARFSAAVLVRKNKQSGVIAEALEERGVPYEVVGLGGL
LEIPEVADMMAIATMLVRPDDWAAALRIVSGPAVGLGMVDIKALAARAKNLAGRLRQPEE
STSGTAEEAEKSSDMQAVDEPQLPEDILEAQLAQALAEEVDHTVGLTDAIADLGEPERYS
AEGLERIAELSSKLRYLRTYCLGKPLSDLFADIIDTFHLRTEVLTHRRAGAVHLDRALEA
IAEFDGEPLAAWLDYAELAREHEDSLAPGETPKANNRVQIMTAHKSKGLEFSSVYVCHAD
SSTYKAQTRTFLTDAARTPHHDWPQLFEAEDRKEFQNNGEAFVAAQKGVDAEENSRLFYV
ALTRAEDELVVTGSEKDPYEHFAEMHRYAQQRAEEAERKAEQPPITIVHWQLDDDADELR
DVTDAKAATEMGETGPLDGTTPNEERAGEVLTGVTAQFPAVRPREEVRRGAELVQQAMGS
LGTDEEIPALGGELFSLWEREATALIEEHRALSAPIVDVEIPGELTASELVALRENPTQF
ARRQRRPVPFKPNAYAKRGTAFHQWIEDRYGANAILDETELPGSEENVEADFDKLKDAFL
ASAWADRTPTNVEQGFEFSLGSSVVRGRMDAVFDLGDEWMVVDWKTGRPPQGEQMRSAVI
QLAVYREAWQRLSGTEKPVRAAFHYIMDNYTFEPKQLPDAGQLASMLQRENGAGTAGHSD
NKGN
NT seq 3435 nt   +upstreamnt  +downstreamnt
atgtctaatgcgacgcacactgggcacaagaattctgggatcgtcagcccgcagctgttg
tcggagatcttgggacaacgctttgctccgacagagcaacaagccgagattattggtgcg
gaacctggaccactgctggtggtggctggcgccggtgccggaaaaactgaaaccatggca
gctcgcgtggtctggttggtcgccaaccggtacgccttgcccgaagaagtgcttggtctt
acgttcacgcgcaaagcatcacaagagttagctaaacgtatccgcgaccggttacaggtg
ctgcgtgactccccacgcttgccagaaatagatccggatgggagcttgcgtgcgaatctg
gaaaccattgcgccacgggtgtctacctatgactcttatgcgggggatttggtgcgcgaa
tacggtcttttgctgccggtcgagcccacttcccggctgattactcgtgcacatttggtc
tccatcgcacagtccgtggtgcgtaactatgagggaaaattagagaccgataaaaaagaa
tccagcatcgttacggaattgctggatttatttgaacgcatggcgaataacctgagcttc
gccgatgatttccgcgaatgtgcgcgcgctttcgctgaggtggaatatttgccacgagca
ccacggcagcggaaagaccttaataaagatgtccaaaactgggttgaccgccagcaactg
cgcatcgattatttgccgatgatcgagcaactggaacgcgaactcatagagcgtaatgca
gtcacttttacccaacagatgtccgctgcggcacagttagcccaacagcatccagcagta
ggcgtttcacagcgacggcagacgaaggtagtcatgctcgatgaataccaagacacttcg
catgcccaacgggtccttttgcgcaacttgttcggtaataccccgcacgaaggattgacg
gtaactgcagtcggtgaccctatgcaggcaatctatggttggcgtggagccacctcagaa
aacctggcgcagttcccccaagatttcccagttggagctgagggagaccagcccgctccc
agcaaagaactcaccacttcctggcgcaacccatccaccgtgttggacattgccaataca
gtgtcccatgccgtgttgggaacaggcccagatcgccctgtcgccccgctggaaccacgc
gccggggcgggagccggagaggtgagttttgggtattggccgaatgcggaggaagaaatt
tcgtgggttgctggaaacctgcaccagaaataccagcaatacttggaacgaaacgagcat
gacccacatgctcgtttcagcgccgcagtacttgtgcggaagaataagcaatcaggggtc
attgcagaagctctagaagaacgaggtgttccgtatgaggtagttggcctgggcggctta
ttagaaatcccggaagttgcagacatgatggcgatcgcaacgatgctggtgcggccagat
gattgggcagcagcattgcgcatcgtctctggacctgcggtggggttggggatggtcgat
atcaaagccttggctgctcgtgcgaaaaacttggctggtcgtttgcgacaaccagaggag
tctacttcggggactgccgaggaagcagagaagtctagcgacatgcaagcagtagatgaa
ccacagttgccggaagacatactggaagcacaattagcgcaagccctagcggaagaagtt
gatcacacagttggcctgactgacgcgattgcagatcttggtgagccggaacgctattcc
gcagagggattagaacgcatagctgaattgtcctcgaagcttcgttatttgcgcacctat
tgtctgggcaagccgttgagtgacttgttcgctgacatcattgataccttccatctccgt
acggaagtgctcacacaccggcgtgccggggcagtgcacttggacagagccttagaagcc
attgctgaatttgacggtgaacccctcgcagcttggcttgattatgctgagctagcgcgg
gaacacgaagattcgttagcaccgggtgagacaccgaaggcgaacaatcgggtacagatt
atgactgcgcataagtcgaaaggcctggagttttcttcggtgtatgtgtgtcacgctgat
tccagcacctacaaggcgcaaactcgtacgttcttgaccgatgctgcgcgtactccacat
catgattggccgcaactattcgaagccgaagatcgtaaagaattccagaacaacggtgag
gcatttgttgctgcgcaaaaaggtgtggatgcggaagaaaattcccgtttattctacgta
gcattaacgcgggctgaagatgaactggtggtcacagggtcggagaaggacccgtatgaa
cactttgcagagatgcatcgttatgcccagcagcgtgcagaagaagccgagcggaaggca
gaacagccaccaatcacgattgtgcattggcagcttgacgacgacgccgatgaacttcgg
gacgtgacggacgctaaggctgccacagagatgggagaaaccggaccgctcgatgggacg
actcctaatgaagagcgtgccggagaagttctaaccggggtcactgcacaatttccggca
gtacgccctcgggaggaagtgcggcgtggcgctgagctagtgcaacaagcaatgggaagc
ctaggaactgatgaagaaatcccggcactaggtggtgagttgttctcgttgtgggaacgc
gaagccaccgcgcttattgaagaacaccgtgcgctttctgcacccattgttgatgtagaa
ataccaggcgagcttactgcgtccgagttggttgctttgcgtgagaatccgactcaattc
gctcggagacaacgtcgcccggttccgtttaagccaaatgcatatgccaagcgaggtaca
gcattccaccaatggatcgaagatcgctatggcgccaacgcgatcttggacgagacggag
ctgccaggtagtgaagaaaacgtggaagcagacttcgacaaattgaaagatgctttcctt
gctagcgcctgggcggatagaaccccgacgaatgttgagcagggcttcgaatttagcttg
ggaagttccgtcgtccgcggccgtatggatgctgtgttcgatttgggagatgaatggatg
gtggtcgactggaaaaccggcaggccaccgcaaggcgagcagatgcgttcggcggttatt
cagttggcggtctatcgtgaagcatggcagcgcctcagtggcaccgaaaaaccggtacgt
gcggcgttccactacatcatggataattacactttcgaacccaagcaactcccagatgct
ggacagcttgcgagcatgctgcagcgcgagaatggggcaggaactgctgggcacagtgat
aataaaggaaactag

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