Corynebacterium pseudodiphtheriticum: L9H27_03245
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Entry
L9H27_03245 CDS
T08839
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cpsp
Corynebacterium pseudodiphtheriticum
Pathway
cpsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L9H27_03245
09124 Replication and repair
03420 Nucleotide excision repair
L9H27_03245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsp03021
]
L9H27_03245
03400 DNA repair and recombination proteins [BR:
cpsp03400
]
L9H27_03245
Enzymes [BR:
cpsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L9H27_03245
Transcription machinery [BR:
cpsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L9H27_03245
DNA repair and recombination proteins [BR:
cpsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L9H27_03245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
UQV57179
LinkDB
All DBs
Position
complement(724096..725766)
Genome browser
AA seq
556 aa
AA seq
DB search
MSFGDGPLIVQSDKTCLLEISHPQADAARAALSPFAELEKAPEHVHTYRITPLALWNARA
AGFDAEQVVDVLETYSKFPVPQSLLVDTAETMSRYGRLRLQNHPTQGLILETTERTVLEE
VSRHRTIAEMLGARIDDDTFSVPPSERGRLKQELLKVGWPVEDLAGYVDGEAHPISLSTE
NVDWQLRDYQRYATESFWEGGSGIVVLPCGAGKTMVGAATMAKAQATTLILVTSTIAGRQ
WRDELIRRTSLQPAEIGEYSGEKKEIKPVTIATYQVVTRKTKGEYRALELFDSRDWGLII
YDEVHLLPAPVFRMAADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKELESQG
FIATAECIEVRADMPSSEKMEYATASSKDRYRLAACSQVKFEVVDKILNKHSGKQTLLIG
AYLDQLQAFARRTGAPLIDGRTSAAKREKLFAQFRTGEITTLVVSKVANFSIDLPDTAVV
VQVSGTFGSRQEEAQRLGRLLRPKSTGEIAYFYTVVTRDTVDATFALHRQRFLAEQGYAY
RLVDANDIPSLKMLEE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttttggcgatggcccgttgatcgtgcaatcagataaaacctgtttgcttgaaatt
tcccacccgcaagcagatgccgcacgggctgcgctctcgccttttgcggagttagaaaaa
gctcccgaacatgtacacacctaccgaattacccccttggctttgtggaatgcgcgtgcc
gcaggctttgatgctgagcaggtagtcgatgtgctggaaacttactcgaaatttccggtt
ccgcaatcattgctggtagataccgctgaaacgatgtctcgctatggtcgcttacggtta
cagaatcaccccacccaggggctcattctagaaaccaccgagcgaaccgtactcgaagag
gtctcccggcaccgcaccattgccgaaatgctcggagcgcgcattgatgatgacacgttt
tcagtcccgccttcagagcgtggacggctcaaacaagaattactgaaagtcggctggccc
gtcgaggatcttgcgggttacgtcgacggcgaagcacacccgatttctttatccacagaa
aacgtcgactggcaactgcgtgattaccagcgttacgccaccgaatcattctgggaaggc
ggatcaggcatagtggtattgccgtgtggcgcagggaaaacgatggtgggcgcggcaaca
atggcgaaagcccaggcgacgactttaattctagtaaccagcacgatcgctgggcgccag
tggcgcgatgagcttatccggcgtaccagtctgcagcccgcggaaatcggcgagtattca
ggcgaaaagaaggaaatcaagccggttactatcgccacgtatcaggtggttacccgcaag
acgaagggcgaatatcgtgcactagagctatttgattcgcgggattggggattaatcatc
tatgacgaagtacatctgctaccagcaccggtattccgaatggctgcggacctacaatca
aggcggcgtttaggactaacagcaaccttaatccgggaggacggccgcgaaggcgatgtc
ttctcattaatcggccccaagcggtatgacgccccgtggaaggaattagaatcccagggt
tttattgcgaccgcagagtgtatcgaagtccgcgcggatatgccgagtagcgaaaaaatg
gagtatgcgactgcctcgtcgaaagaccgctaccgcctggcagcttgctcgcaagtaaaa
ttcgaggtcgtcgacaagatcctcaacaaacattccggcaagcagactttattaattggt
gcataccttgatcaattacaagccttcgctcgacgcaccggagccccactcattgatggg
agaacgtctgcggccaagcgagaaaaactatttgcgcaattccgtacgggtgaaatcaca
accctggtggtatcaaaggtagcgaatttttcaatcgatctgccggacaccgccgtcgtt
gtccaggtgtcgggtacgtttggttcccggcaagaggaagcccaacggctaggcaggttg
ttgcggccgaaatctaccggcgaaattgcctatttttacacggtggtcacccgagatact
gtcgatgcaactttcgcgctgcaccggcagcgattcttagctgaacagggctatgcctac
agattagtcgacgcaaacgacattccaagcttaaagatgctcgaagaataa
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