KEGG   Corynebacterium pseudodiphtheriticum: L9H27_03380
Entry
L9H27_03380       CDS       T08839                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cpsp  Corynebacterium pseudodiphtheriticum
Brite
KEGG Orthology (KO) [BR:cpsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpsp03400]
    L9H27_03380
Enzymes [BR:cpsp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     L9H27_03380
    5.6.2.6  RNA 3'-5' helicase
     L9H27_03380
DNA repair and recombination proteins [BR:cpsp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    L9H27_03380
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr Helicase_C WH2_Lhr AlkZ-like ResIII DUF6406
Other DBs
NCBI-ProteinID: UQV56791
LinkDB
Position
753113..757930
AA seq 1605 aa
MPDDVLSRFSPPVAGWFREVFARPTPVQQQAWQAVSAGKNALVVAPTGSGKTLAAFFWAL
NGLIAGDGQLSLPVGNSQVSLADAGKPGVKVLYISPLKALGVDVERNLHAPLTGIERVAQ
RLGMDTPAVSIGVRSGDTPQAERARQLRRPPDILITTPESAYLMLTGKAAGILTTVTTVI
VDEIHALAGSKRGVHLALTLERLARIAEDPQRIGLSATVRPIESVAQFLGGDRAVEIVAP
PAQKAWELAVRVPVDDMSDLPVPEQASTIGEMTVDDPLGLSSGGAPDAASSTFASDSALP
TAKSIWPHIETELYQTIMECNSTLVFVNSRRTAERLTSRLNELYAAEHAPESLSTSTRRD
PAQLMKHTDIAGTAPSVIARAHHGSVSKDERAQTESLLKQGALKAVVATSSLELGIDMGA
VEQVVQVESPPSVASALQRVGRAGHSVGAVSKGDFYPKHRADLLQTAVTVGRVAPGLIEK
IHVPRNPLDVLVQQTIAAVAVEDLDVDEWFTTIRRAWPYRDLDREVFESVLDLASGLYPS
TDFSELKPRIVFDRVRNTLSTRPGSQRVAVTSGGTIPDRGMFGVFLAGTTDTATGASTTR
GDTTSKATPRRVGELDEEMVYESRVGDVFTLGASSWRIEDITRDQVIVTPAPGHTGRLPF
WSGDQLGRPYELGLALGEFRREAHRKREALLDELPLDERARANVLGYLDEQYEATGLIPD
EKTLVLERFRDELGDWRVVLHTPFGRGVNAAWALAVGARIADNTGMDAQAVAGDDGIVLR
VPEGEQQPDASLFIFATDEIEDIVTNQVGNSALFASRFRECAARALLLPRYNPGKRAPLW
QQRQKAEQLLDVARKYPSFPIILETVRECLQDVYDLPALNEVTRGIAQRNIRIAEVTTEQ
PSPFSSSLLFNYTGAFMYEGDSPLAEKRAAALSLDPSLLAKLLGTVELRELLDPSVITTV
HESLQHTAPDRRAQTAEQLADTLRRIGPIPVARFAEYADISVARALRELGSRVMLVRMVG
EDYLAQSHDAALLRDGLGIPVPPGVLAPTETIDDALAQLLKRWSRARGPFVIHDAAQAFG
LSISSAWHIVQGLAASGELVEGHYRQGIDELEYCASGVLKQIRSRSLAAARKAQKPVSES
AFARFLLDWHQITEIPGGAPGTVGTTGPRTSHASAREQGLRGADGVFAAVEQLAGVRLPA
SAWEHLVLPSRVPGFSPRHLDELTSNGEVLIRGAGQAGSNDPWIMLLPAEYAAQLAPIAD
GENPNLSAVQQAIVDVLRNGGGYLFADIVDRLSLHSSDAVREGLWGLVDLGMVSPDSFAP
LRARLAGGTGRAHKAKRQPRRSRLRLGCTSFATGQNARPAQATPPDMVGRWALTIPADTD
ATARSVAQGEAWLDRYGVVSRGSIVSEDVPGGFALAYKVLSEFESTGKAQRGYFIEGLGA
AQFSTPAVVDRLRGCDDAPDVHGWPSGTAQPSIVLIAATDPANPYGAALDWPRADGETAD
TGSTARARPSRAAGALVVLVDGLCLAHLSRGGKTLTTFFEALPEDIEQDPTQLLVTALQA
GLEKEWIRPLIIEKANGTAILGSALAISMREHGAKLSPKGIRLGN
NT seq 4818 nt   +upstreamnt  +downstreamnt
atgcctgatgacgtcctatctcgtttcagcccgccagtggcaggctggtttcgtgaagtc
tttgctcggcccacgcccgtgcaacaacaagcctggcaagcggtttctgcagggaaaaac
gcgctggttgtggccccaacggggtctggtaaaaccctggcggcgttcttttgggcgctt
aacgggctcatcgctggcgatggtcagcttagcctgccggttggaaacagccaggtctct
cttgccgacgcaggcaaacccggggttaaggtgctgtatatttcgccgctgaaagccttg
ggcgtcgacgtcgaacgaaacttacacgccccattgaccggcattgagcgggttgcacaa
cgtctcggtatggataccccagcggtcagcatcggagtacgcagtggtgataccccgcaa
gcagaacgcgcgcggcaactgcgtcgcccgccggatattttgatcactacccccgaatcg
gcttatctcatgctcacgggtaaagccgccgggattttaacgaccgttaccaccgtgata
gtcgatgaaatccatgcgctagctgggagtaaacgtggggtgcacctagcgctcacacta
gaacgattggcgcgcatcgccgaggacccacaacgaatcggtttgtctgccacagtgcgc
ccgattgaatccgtggcgcagtttttgggtggtgaccgagccgtggaaattgtcgcgcca
ccagcgcagaaggcttgggaacttgctgtgcgcgtgccggtagatgacatgtcagattta
ccggtaccggaacaagcctcgacgatcggggagatgacggtcgatgatccattggggtta
agcagcggtggtgcgcccgacgctgctagctctacctttgctagtgattcggcgttgcca
accgcgaaatcaatctggccgcatatcgaaactgagctctaccaaaccatcatggaatgc
aactccactctggtgttcgtgaattcccggcgaaccgcagagcgactgacttctcgtctc
aacgaactctatgccgccgagcatgccccagaatcactgtcgacgtcgacgcgccgggac
cccgcgcagttgatgaaacacactgatatcgcgggtactgcgccatcagttattgcccgc
gcacaccacggctcggtctctaaagatgaacgtgcgcagacggaatccctgctgaaacaa
ggtgcgttgaaagctgtcgtcgcgaccagttcattggaactaggcatcgatatgggggca
gtcgaacaggtagtgcaagtagaatcaccaccgtcggtggcctccgccttgcaacgagtt
ggccgcgccggccacagcgtaggggccgtttcaaaaggagatttttacccgaagcaccgc
gcggatctcttacaaactgcagtcaccgtcggccgggtagccccaggattgatcgaaaag
atccatgttccacgcaatcctctggacgtgttggtgcagcaaaccatcgctgcggtagca
gtggaagatctggacgtagatgaatggtttactactattcgtcgcgcctggccgtatcgt
gatttggaccgcgaggtcttcgaatcggtgctagatctggccagcggactgtaccctagt
accgatttttctgagttgaaaccgcgcattgtgtttgaccgggtgcgcaacactttgtct
acccggcctggttcgcaacgagtggcggtaacaagcggcggcactatcccggatcgtggc
atgttcggggtttttctggcgggtacgacagacacagccactggagctagcaccactcgc
ggcgacacgaccagcaaagccaccccgcgccgggtcggtgagctagacgaagaaatggtg
tacgaatcccgcgtcggggatgttttcaccctaggcgcgagcagctggcgcatcgaagac
atcacgcgtgatcaagtcatcgtgactcccgcgccgggccacacggggcgtctgccgttt
tggagcggcgatcagctaggacgcccttatgagctgggattagctttgggcgaatttcga
cgcgaagcccaccgaaaacgagaggctttgctggatgagcttccattagatgagcgtgcg
cgagccaacgtattgggttatttggatgagcaatacgaagcaactgggctgatcccggat
gaaaaaacactggttctggaacgttttcgtgacgaactcggtgactggcgcgtcgtcttg
cacaccccttttgggcgtggtgtcaacgctgcctgggcattagcggttggtgcgcgcatt
gcggacaacaccggaatggatgcccaagcagtggccggtgatgatggcattgtgctgcga
gtgcctgaaggcgagcagcagccagatgcgtcactgtttatcttcgctactgatgagatc
gaagacatagtgaccaatcaagtgggtaattctgcgttatttgcttcgcggtttcgtgaa
tgcgcggcacgtgcgctgttattgccgcgctacaacccgggtaaacgcgccccgctatgg
cagcagcggcaaaaggcagaacaactactggacgtggcacggaagtatccgtcctttcct
atcattttggaaaccgtgcgtgaatgcttacaagatgtctatgatcttccggcattaaat
gaggtcacccgtggtattgcccagcgcaatattcggattgcggaagtgaccacggagcaa
ccatcgccattttcttcgtcgttgttgtttaattacaccggcgcgttcatgtatgaaggc
gatagcccactggctgagaaacgggcagcggcgctgtcattggacccaagcttgctggca
aagctactgggcaccgtggagctacgtgaactcttggatccgagcgtgatcacgacggtg
catgaatcgctgcagcacactgcgccagatcgccgagcccagacagcagaacaattagcc
gataccctgcgacgcatcggacccatcccagttgcacggtttgctgaatatgcagacatt
tctgtcgccagagccctgcgcgagttgggctcacgtgtgatgttggtgcgcatggtgggc
gaggactatctggcgcaatcccacgatgcagcgttgcttcgcgacggactaggaatacca
gtaccacccggtgtgctggcacctactgagaccattgatgatgctctcgcacaattacta
aagcgctggtctcgggcacgaggcccgtttgtaatacacgatgctgcgcaagcattcggc
ctaagtatctccagtgcctggcatatcgtacaaggattagctgccagcggtgagttagtg
gaaggacactaccgccaagggattgatgaactggaatattgcgcttcgggagtattaaag
cagatccgttcgcgctcgttggcggcggcccgcaaagcgcaaaaacctgtgagtgagtca
gcgtttgctcgcttcttattagattggcatcagataaccgagatacctggcggtgcgccc
ggcacagttgggactacaggccctcgtacttcccacgccagtgcaagggagcaagggctg
cgcggggcggatggggttttcgcagcagtcgagcaattagccggggtgcggttgccggcg
agtgcttgggagcatctggtgttgccgtcccgggtacccggttttagcccgcgtcacctc
gacgaactcaccagcaatggggaagtgctgatcaggggagcggggcaagctgggagcaat
gacccttggatcatgttgttgcctgctgaatatgcggcgcagcttgcgccaattgcggat
ggggaaaatccgaatctgtcggccgtgcagcaagccatcgtcgacgtcttgcgcaatggt
ggtggctatctgtttgcggatatcgtcgaccggctaagcctgcattctagtgatgcagtt
cgcgagggcctatggggcctggttgatcttgggatggtcagcccggatagttttgctccg
cttcgcgcacggctggcgggtggtacgggcagggcgcacaaagctaagcgacagccccgt
cgctcccgtttgcgcttgggatgcacgagtttcgccaccgggcagaacgcccggccagct
caggctacaccgccggatatggtggggcgttgggcactgacaatacctgccgacaccgac
gccacggcacgctcggtagcccaaggcgaggcctggctcgaccgttatggtgtggtcagt
cgtggcagcattgtatccgaggatgtgcctggtggtttcgccttggcatacaaagtattg
agtgagtttgaatccaccggtaaagcccaacgtgggtatttcattgaagggctgggggca
gcacagttttcgacgcccgcagtggtggaccggctacgtggttgtgatgatgctccagat
gtacacgggtggccgtcgggaacagcgcagccgagcatagttctgatagctgccactgat
ccggcgaatccgtacggggcggcgttggattggccgcgtgcggacggtgagacagcagat
accggaagcactgctcgtgcgcgtccgtcccgtgctgctggtgccctggttgtgcttgtc
gacggattatgtttggcgcatctgagccgaggcggaaaaaccttgacgacgtttttcgaa
gctttaccagaagacatcgaacaggatccgacacaattattggtgactgcactacaggct
ggattggaaaaagagtggatccgcccgttgattatcgaaaaggccaatggaacagcaatc
ctggggtcggcgctggcaatttctatgcgagaacatggcgctaaactcagcccgaaaggt
atccggctgggaaactag

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