Corynebacterium pseudodiphtheriticum: L9H27_04000
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Entry
L9H27_04000 CDS
T08839
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cpsp
Corynebacterium pseudodiphtheriticum
Pathway
cpsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
L9H27_04000 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpsp03400
]
L9H27_04000 (xseA)
Enzymes [BR:
cpsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
L9H27_04000 (xseA)
DNA repair and recombination proteins [BR:
cpsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
L9H27_04000 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Fe-ADH
DHQ_synthase
Ribosomal_L16
Motif
Other DBs
NCBI-ProteinID:
UQV56902
LinkDB
All DBs
Position
complement(886611..887849)
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AA seq
412 aa
AA seq
DB search
MSKPPATLENPWSVSTANTEIKGWIERLGYLWVEGQLTQVNMKPSWKLSYLTLRDVNQEM
SVSLTTSTQLLQNLPTPIKDGDRIVVYGKPAFYAGRGSFSLWVTDIRHVGVGELLARIEN
LRRQLAAEGLFDASKKLPLPYLPRTVGLITGRGSAAERDVLSVARDRWPAVDFRVINTAV
QGAQAVSQVIDALQQLDADDEVDVIIIARGGGSVEDLLPFSEEALQRAVAAARTPVVSAI
GHEPDSPVLDNVADLRAATPTDAAKRVIPDVAEERALLDEARSRMAQAIGQWVARERQNL
DALCSRPVLADPRTPIKARHDELENALAAIRREIRHVVGQESSRVAALRGQVSALGPAST
LERGYSIVQVLPRDGDPEVVTTIAQAPPGSQLRIRVADGSITAAGMGTQHAD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaccacccgctacgctagagaatccatggtcagtcagcactgccaataccgag
atcaagggctggattgaaaggctcggttatttgtgggtcgaaggccaactcacgcaggtc
aacatgaaaccgtcgtggaagctgtcctatctcactttgcgcgacgtcaaccaggaaatg
tcggtttctctcacgacctccacacaattactgcaaaatttgcctactccgattaaagat
ggcgatcgcatcgtggtgtacggcaagccagcgttttacgcaggccgtgggtcattttca
ttatgggtgactgatattcggcatgtgggggtcggtgaactactcgctcgcatcgaaaat
ctgcgtcggcagcttgccgctgaaggccttttcgacgcctcgaaaaaacttccgctccct
tatcttccccgtacagtgggtctgattaccgggcgaggatcagctgctgaacgtgacgtt
ctttcagtagcacgtgaccgctggcctgccgtggacttccgcgttattaataccgcagtg
cagggtgcccaagcggtcagtcaagtaatagacgcactccagcagctagacgccgacgac
gaggttgatgtcatcatcatcgcacgtggcggcggcagcgtggaagacttgttaccgttt
tccgaagaagctctgcaacgtgcagtagcagcggcacgcacacccgtcgtttcagcaatc
ggccatgaaccagattcaccggttctggacaatgtcgcagacctacgtgcagcgactccg
acggatgcggcaaagagagtaatccctgacgtcgccgaggaacgcgcgcttctcgacgaa
gcacgctcccgaatggcacaggctatcggacagtgggtagcacgcgaacgacaaaatctg
gatgctttatgctcccgcccggtgttggcggacccgcgtaccccgatcaaagcccggcac
gacgaactcgaaaatgcattagctgctattcgtcgggaaatccgtcatgtcgttggccag
gaaagctcgcgggttgcagctctacgcggacaggtttctgcgctcgggccagcatccaca
ttagaacgtggttattcaatcgtgcaggtactgcctcgtgatggtgatccagaggttgtg
accacgattgcacaagcacctcctggttctcaattacgcattcgcgtcgccgacggctcg
atcactgcggcaggtatgggaacccagcatgcggattaa
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